RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 C3P1Q6ZMU1 363 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 NCCRP1Q6ZVX7 275 aaPredicted RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 ACAD11Q709F0 780 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 CD163Q86VB7 1156 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 PSD4Q8NDX1 1056 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 SRFBP1Q8NEF9 429 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 WDR34Q96EX3 536 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 WDR83Q9BRX9 315 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 ROGDIQ9GZN7 287 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 DERL2Q9GZP9 239 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 RHOJQ9H4E5 214 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 HPF1Q9NWY4 346 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 VTI1BQ9UEU0 232 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 ERVK-11Q9UQG0 969 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 HRH3Q9Y5N1 445 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 CLCA3PQ9Y6N3 262 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 ANKRD17O75179 2603 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.18
VAPA-209ENST00000585042 CELSR1Q9NYQ6 3014 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 OR14I1A6ND48 311 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 TMEM200CA6NKL6 621 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 E7ESA3 106 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ACOT7O00154 380 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 CLGNO14967 610 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ZNHIT1O43257 154 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 GDF5P43026 501 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 DR1Q01658 176 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 BIKQ13323 160 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 LAPTM5Q13571 262 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 BMPR2Q13873 1038 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 SERTAD2Q14140 314 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 SLBPQ14493 270 aaKnown RBP eCLIP13.95□□□□□ -0.18
VAPA-209ENST00000585042 TSNQ15631 228 aaKnown RBP13.95□□□□□ -0.18
VAPA-209ENST00000585042 NDUFAF5Q5TEU4 345 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 SULT1C3Q6IMI6 304 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ABHD17CQ6PCB6 329 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 HSDL2Q6YN16 418 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 OR52N2Q8NGI0 321 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ANKRD49Q8WVL7 239 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ASB15Q8WXK1 588 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
VAPA-209ENST00000585042 SGCZQ96LD1 299 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ZDHHC11Q9H8X9 412 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 LYRM4Q9HD34 91 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 KCNJ16Q9NPI9 418 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 KCMF1Q9P0J7 381 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 ITGB1BP2Q9UKP3 347 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 DAPP1Q9UN19 280 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 HIVEP1P15822 2718 aa13.95□□□□□ -0.18
VAPA-209ENST00000585042 TGFBR3LH3BV60 316 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 CDC40O60508 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
VAPA-209ENST00000585042 OR2J2O76002 312 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 CNR1P21554 472 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PLA2G16P53816 162 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 SLC12A2P55011 1212 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 LIM2P55344 173 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PPIAP62937 165 aaKnown RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 CEP128Q6ZU80 1094 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 CYS1Q717R9 158 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 CDH24Q86UP0 819 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 SLC22A16Q86VW1 577 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 MARVELD2Q8N4S9 558 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 GOLM1Q8NBJ4 401 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 FBXO36Q8NEA4 188 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 OR2M7Q8NG81 312 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 OR5L2Q8NGL0 311 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 OR14A16Q8NHC5 309 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PTPMT1Q8WUK0 201 aaPredicted RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 CCT6BQ92526 530 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 TSPAN17Q96FV3 270 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PWWP2AQ96N64 755 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 EFCAB11Q9BUY7 163 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 ALOXE3Q9BYJ1 711 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 PRDM7Q9NQW5 492 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 DNAJC11Q9NVH1 559 aa13.94□□□□□ -0.18
VAPA-209ENST00000585042 ZNF490Q9ULM2 529 aaPredicted RBP13.94□□□□□ -0.18
VAPA-209ENST00000585042 A0A1B0GVC2 190 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 BCKDKO14874 412 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TP73O15350 636 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TAPBPO15533 448 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 PRKNO60260 465 aaPredicted RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 STK16O75716 305 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TOXO94900 526 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 WISP3O95389 354 aaPredicted RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 TBX6O95947 436 aaPredicted RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 IGHG3P01860 377 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 IFNA16P05015 189 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 RFC3P40938 356 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 CASP2P42575 452 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 KCNC1P48547 511 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 HNRNPFP52597 415 aaKnown RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 KRTAP10-9P60411 292 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms