RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 IFT20Q8IY31 132 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 TEX9Q8N6V9 391 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 APCDD1LQ8NCL9 501 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 B3GNT7Q8NFL0 401 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 DNAJB8Q8NHS0 232 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 NR4A3Q92570 626 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 REPS1Q96D71 796 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 CMTM7Q96FZ5 175 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 UTP23Q9BRU9 249 aaKnown RBP12.31□□□□□ -0.44
ERBB2-220ENST00000584684 VPS11Q9H270 941 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 TRIM45Q9H8W5 580 aaPredicted RBP12.31□□□□□ -0.44
ERBB2-220ENST00000584684 ADAP2Q9NPF8 381 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 PRTFDC1Q9NRG1 225 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 KCMF1Q9P0J7 381 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 ANGPTL3Q9Y5C1 460 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 PCDHGA11Q9Y5H2 935 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 CENPEQ02224 2701 aa12.31□□□□□ -0.44
ERBB2-220ENST00000584684 WIPF3A6NGB9 483 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 GABRR3A8MPY1 467 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 STX16-NPEPL1H3BU86 382 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 TGFBR3LH3BV60 316 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 STX16O14662 325 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 F10P00742 488 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 GP1BBP13224 206 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 HIST1H1TP22492 207 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ATP5A1P25705 553 aaKnown RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 TRHRP34981 398 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 HNRNPFP52597 415 aaKnown RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 SLC13A2Q13183 592 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 GTF2H2Q13888 395 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 C10orf62Q5T681 223 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 FCRLBQ6BAA4 426 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 GTF2H2CQ6P1K8 395 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ZGRF1Q86YA3 2104 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 PLD6Q8N2A8 252 aaKnown RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 KIF2BQ8N4N8 673 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 HORMAD2Q8N7B1 307 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ACOT4Q8N9L9 421 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 L3MBTL4Q8NA19 623 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 FAM47BQ8NA70 645 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 TMEM52Q8NDY8 209 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 C7orf57Q8NEG2 295 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 HUS1BQ8NHY5 278 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 TRIM44Q96DX7 344 aaPredicted RBP12.3□□□□□ -0.44
ERBB2-220ENST00000584684 SCMH1Q96GD3 660 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 DMRT3Q9NQL9 472 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 PSD3Q9NYI0 1048 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 FETUBQ9UGM5 382 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 NFU1Q9UMS0 254 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
ERBB2-220ENST00000584684 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 TRIM49D1C9J1S8 452 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MAN1A2O60476 641 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CTNSO60931 367 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MYO1DO94832 1006 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 RASAL1O95294 804 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 LDLRP01130 860 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 PCNAP12004 261 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CD96P40200 585 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 SSR2P43308 183 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 GPR143P51810 404 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MLF1P58340 268 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 PHEXP78562 749 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 OR1C1Q15619 314 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 DEPDC1Q5TB30 811 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 TIFABQ6ZNK6 161 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 GOLGA7Q7Z5G4 137 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 LCA5Q86VQ0 697 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 RPS19BP1Q86WX3 136 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CYP4X1Q8N118 509 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 PTGR2Q8N8N7 351 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 EIF1ADQ8N9N8 165 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CSF3RQ99062 836 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MRPL57Q9BQC6 102 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 TXLNGYQ9BZA5 131 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 MS4A12Q9NXJ0 267 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 ERRFI1Q9UJM3 462 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-220ENST00000584684 SPACA6W5XKT8 324 aa12.29□□□□□ -0.44
ERBB2-220ENST00000584684 ASPDHA6ND91 283 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 FOXE1O00358 373 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 RIPK2O43353 540 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 NEURL1O76050 574 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 SIX3O95343 332 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms