RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SCNM1Q9BWG6 230 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 FAIM2Q9BWQ8 316 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 WDR41Q9HAD4 459 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 THSD1Q9NS62 852 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 FOXJ2Q9P0K8 574 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 HCN3Q9P1Z3 774 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 GPN3Q9UHW5 284 aaPredicted RBP17.32■□□□□ 0.36
RFFL-211ENST00000584541 DLGAP4Q9Y2H0 992 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 MAP4K5Q9Y4K4 846 aa17.32■□□□□ 0.36
RFFL-211ENST00000584541 NUP210LQ5VU65 1888 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 CDRT15L2A8MXV6 281 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 C9J4A7 227 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 NDUFAB1O14561 156 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 DXOO77932 396 aaKnown RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 DLGAP3O95886 979 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 G6PDP11413 515 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 NCF2P19878 526 aaPredicted RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 IL10P22301 178 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 LIM2P55344 173 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 RAB38P57729 211 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 TAS2R50P59544 299 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MAP7Q14244 749 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 HEPACAMQ14CZ8 416 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 ZNF385CQ66K41 422 aaPredicted RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 TMEM198Q66K66 360 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MRM1Q6IN84 353 aaKnown RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 TMEM132CQ8N3T6 1108 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 ESX1Q8N693 406 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 OR5T3Q8NGG3 340 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 OR51Q1Q8NH59 317 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 BCAS4Q8TDM0 211 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 TSSK3Q96PN8 268 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MAPKAP1Q9BPZ7 522 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MYNNQ9NPC7 610 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MKKSQ9NPJ1 570 aaPredicted RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 MRGBPQ9NV56 204 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 AIG1Q9NVV5 245 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 TRPC4Q9UBN4 977 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 PADI1Q9ULC6 663 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 G3BP2Q9UN86 482 aaKnown RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 MAPRE3Q9UPY8 281 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 MRPS33Q9Y291 106 aaKnown RBP17.31■□□□□ 0.36
RFFL-211ENST00000584541 ARL2BPQ9Y2Y0 163 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 NEUROG3Q9Y4Z2 214 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 ASB4Q9Y574 426 aa17.31■□□□□ 0.36
RFFL-211ENST00000584541 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 SCN2AQ99250 2005 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 TRABD2BA6NFA1 517 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 STMND1H3BQB6 276 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 ONECUT2O95948 504 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 ALDOCP09972 364 aaKnown RBP17.3■□□□□ 0.36
RFFL-211ENST00000584541 DIO3P55073 304 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 HNRNPH2P55795 449 aaKnown RBP17.3■□□□□ 0.36
RFFL-211ENST00000584541 CBX1P83916 185 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 MAT1AQ00266 395 aaKnown RBP17.3■□□□□ 0.36
RFFL-211ENST00000584541 OCA2Q04671 838 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 IKBIPQ70UQ0 350 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 NLGN4XQ8N0W4 816 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 NLGN4YQ8NFZ3 816 aaPredicted RBP17.3■□□□□ 0.36
RFFL-211ENST00000584541 FKBP10Q96AY3 582 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 PEX11GQ96HA9 241 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 MARK4Q96L34 752 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 CATSPER2Q96P56 530 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 ASCL3Q9NQ33 180 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 KCMF1Q9P0J7 381 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 HEY2Q9UBP5 337 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 ZNF282Q9UDV7 671 aaPredicted RBP17.3■□□□□ 0.36
RFFL-211ENST00000584541 BAIAP2L1Q9UHR4 511 aa17.3■□□□□ 0.36
RFFL-211ENST00000584541 BLACEA4D250 179 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 PROM1O43490 865 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 BRINP1O60477 761 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 IL3P08700 152 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 CD63P08962 238 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 NR2F6P10588 404 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 ITGAXP20702 1163 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 JAK1P23458 1154 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 TACR1P25103 407 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 RPL3P39023 403 aaKnown RBP17.29■□□□□ 0.36
RFFL-211ENST00000584541 XCR1P46094 333 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 SHC2P98077 582 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 TNFRSF17Q02223 184 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 KLC1Q07866 573 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 C2orf80Q0P641 193 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 SYT16Q17RD7 645 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 NDUFAF5Q5TEU4 345 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 OVCH1Q7RTY7 1134 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 MIER2Q8N344 545 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 ANKS4BQ8N8V4 417 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 CCDC197Q8NCU1 140 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 STARD8Q92502 1023 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 TBC1D20Q96BZ9 403 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 TM4SF18Q96CE8 201 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 OR1F2PQ96R84 312 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 SPRY4Q9C004 299 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 DPY30Q9C005 99 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 MIEF1Q9NQG6 463 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 MSRB2Q9Y3D2 182 aa17.29■□□□□ 0.36
RFFL-211ENST00000584541 ATG4BQ9Y4P1 393 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms