RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 FAM111AQ96PZ2 611 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 SLCO5A1Q9H2Y9 848 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 ESRP2Q9H6T0 727 aaKnown RBP8.43□□□□□ -1.06
GGA3-212ENST00000582376 LRRC40Q9H9A6 602 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 CLK4Q9HAZ1 481 aaKnown RBP8.43□□□□□ -1.06
GGA3-212ENST00000582376 SLC2A6Q9UGQ3 507 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 ANAPC5Q9UJX4 755 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 LAMP3Q9UQV4 416 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 PCDHA13Q9Y5I0 950 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 ROS1P08922 2347 aa8.43□□□□□ -1.06
GGA3-212ENST00000582376 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 UBFD1O14562 309 aaKnown RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 MSTNO14793 375 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 NDUFS4O43181 175 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ZNF354AO60765 605 aaPredicted RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 SYF2O95926 243 aaKnown RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 SERPING1P05155 500 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 CYP4B1P13584 511 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 PPP2R1BP30154 601 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 CD79BP40259 229 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 PRAMEP78395 509 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 MYL5Q02045 173 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 GAB1Q13480 694 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 GBX1Q14549 363 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 TMEM249Q2WGJ8 235 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 NHSL2Q5HYW2 709 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 ZNF550Q7Z398 422 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 MILR1Q7Z6M3 343 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 LRRC6Q86X45 466 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 CDKL3Q8IVW4 592 aaPredicted RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 KLHDC8BQ8IXV7 354 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 LRRC56Q8IYG6 542 aaPredicted RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 TMEM132CQ8N3T6 1108 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 MFSD9Q8NBP5 474 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 OR5L2Q8NGL0 311 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ZPLD1Q8TCW7 415 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 PAQR8Q8TEZ7 354 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 UCN3Q969E3 161 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ANKRD9Q96BM1 317 aaPredicted RBP8.42□□□□□ -1.06
GGA3-212ENST00000582376 PACSIN1Q9BY11 444 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 P2RY12Q9H244 342 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 ADAP2Q9NPF8 381 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 SLC6A5Q9Y345 797 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 TGP01266 2768 aa8.42□□□□□ -1.06
GGA3-212ENST00000582376 hCG_1818297A0A087WSY0 165 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 APOC4-APOC2K7ER74 178 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 OVOL3O00110 214 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 APOC2P02655 101 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 C1QAP02745 245 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 SERPIND1P05546 499 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 ZNF888P0CJ79 500 aaPredicted RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 RPS3P23396 243 aaKnown RBP eCLIP8.41□□□□□ -1.06
GGA3-212ENST00000582376 SLCO1A2P46721 670 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 TTPAP49638 278 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 RNF4P78317 190 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 VLDLRP98155 873 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 DEFA6Q01524 100 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 PWP1Q13610 501 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 RPS6KA1Q15418 735 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 KLHL38Q2WGJ6 581 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 BBS9Q3SYG4 887 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 FAM174BQ3ZCQ3 159 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 BEX5Q5H9J7 111 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 DCST1Q5T197 706 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 TSTD2Q5T7W7 516 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 HIST2H2BDQ6DRA6 164 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 DNM1P46Q6ZS02 220 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 SH2D5Q6ZV89 423 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 SCUBE1Q8IWY4 988 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 GCNT2Q8N0V5 402 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 ARIH2OSQ8N7S6 290 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 TC2NQ8N9U0 490 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 OR8K3Q8NH51 312 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 ABTB1Q969K4 478 aaPredicted RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 TNFRSF13CQ96RJ3 184 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 ANP32EQ9BTT0 268 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 UGT2B28Q9BY64 529 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 NUP62CLQ9H1M0 184 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 PROK2Q9HC23 129 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 CCDC177Q9NQR7 707 aaPredicted RBP8.41□□□□□ -1.06
GGA3-212ENST00000582376 PRTFDC1Q9NRG1 225 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 HOMER3Q9NSC5 361 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 CATSPERZQ9NTU4 200 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 ZNF148Q9UQR1 794 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 CLCA3PQ9Y6N3 262 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 FREM3P0C091 2139 aa8.41□□□□□ -1.06
GGA3-212ENST00000582376 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.4□□□□□ -1.06
GGA3-212ENST00000582376 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.4□□□□□ -1.06
GGA3-212ENST00000582376 TGFBR3LH3BV60 316 aa8.4□□□□□ -1.06
GGA3-212ENST00000582376 LMX1BO60663 402 aa8.4□□□□□ -1.06
GGA3-212ENST00000582376 NDUFS3O75489 264 aa8.4□□□□□ -1.06
GGA3-212ENST00000582376 TNFSF13O75888 250 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms