RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RUNX3Q13761 415 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 ARMCX4Q5H9R4 360 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 NHLRC3Q5JS37 347 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF506Q5JVG8 444 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 SPOUT1Q5T280 376 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 ATAD3CQ5T2N8 411 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RFPL4BQ6ZWI9 263 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 SLFN11Q7Z7L1 901 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 PHLDB2Q86SQ0 1253 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 DZIP1Q86YF9 867 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 HIPK1Q86Z02 1210 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 SLC35C1Q96A29 364 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 BPIFA2Q96DR5 249 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RADILQ96JH8 1075 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RCHY1Q96PM5 261 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 RAB3IPQ96QF0 476 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 MTIF3Q9H2K0 278 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 PNNQ9H307 717 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 LIME1Q9H400 295 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 MINDY3Q9H8M7 445 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 SP140LQ9H930 580 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 THYN1Q9P016 225 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 CFDP1Q9UEE9 299 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 UBQLN2Q9UHD9 624 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 MGAT4AQ9UM21 535 aa2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 NIP7Q9Y221 180 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMCHD1-206ENST00000581631 UMODL1Q5DID0 1318 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 A0A0B4J203 849 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TEX48A0A1B0GUV7 120 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 C2orf92A0A1B0GVN3 265 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TMEM129A0AVI4 362 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 CCDC162PA2VCL2 907 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 HTR3EA5X5Y0 456 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 C5orf52A6NGY3 159 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 SELENOFO60613 162 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 IGHG1P01857 330 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 APOA4P06727 396 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TIA1P31483 386 aaKnown RBP eCLIP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 FOLH1Q04609 750 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 CETN1Q12798 172 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 CDO1Q16878 200 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 Q1RN00 199 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 RFTN2Q52LD8 501 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 NEPROQ6NW34 567 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TRAT1Q6PIZ9 186 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TMEM64Q6YI46 380 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 SPATA19Q7Z5L4 167 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 LRRC49Q8IUZ0 686 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 C11orf42Q8N5U0 333 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 OR1B1Q8NGR6 318 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 OR13C5Q8NGS8 318 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 SERAC1Q96JX3 654 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 ANKRD27Q96NW4 1050 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 PRMT1Q99873 361 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 BAG1Q99933 345 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 APOL2Q9BQE5 337 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 UBE2TQ9NPD8 197 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 SPATA2Q9UM82 520 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 NAALAD2Q9Y3Q0 740 aa2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 HBS1LQ9Y450 684 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-206ENST00000581631 SCO2O43819 266 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 DKC1O60832 514 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 FGF19O95750 216 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 ZFYP08048 801 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 HCKP08631 526 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SPRP35270 261 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 NPBWR1P48145 328 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 CEACAM7Q14002 265 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 CCBE1Q6UXH8 406 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 NUFIP2Q7Z417 695 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SERINC5Q86VE9 423 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 ANKRD46Q86W74 232 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 TBC1D10CQ8IV04 446 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 ELMOD1Q8N336 334 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 CARNMT1Q8N4J0 409 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 OR6T1Q8NGN1 323 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 OR6F1Q8NGZ6 308 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SETD6Q8TBK2 473 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 MRAPQ8TCY5 172 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 GPR148Q8TDV2 347 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SAP25Q8TEE9 199 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 PCNPQ8WW12 178 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SGF29Q96ES7 293 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF274Q96GC6 653 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SERINC2Q96SA4 455 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 AP1M1Q9BXS5 423 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 NMUR1Q9HB89 426 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 SH3GLB2Q9NR46 395 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 DHRS4-AS1Q9P1J3 65 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 NTNG1Q9Y2I2 539 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 CPQQ9Y646 472 aa2.41□□□□□ -2.02
SMCHD1-206ENST00000581631 ANKDD1BA6NHY2 528 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 TMCO5BA8MYB1 307 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 FAM220BPB1ANY3 271 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 P2RX6O15547 441 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF253O75346 499 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 KRT3P12035 628 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 ANPEPP15144 967 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 SLC1A6P48664 564 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms