RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PCTPQ9UKL6 214 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 FBXW2Q9UKT8 454 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 DAPP1Q9UN19 280 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 IKBKGQ9Y6K9 419 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 DYTNA2CJ06 578 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 BLACEA4D250 179 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 OR5H15A6NDH6 313 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 A8MT66 165 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 LDB3O75112 727 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 KRT38O76015 456 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 GBAP04062 536 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 ICAM2P13598 275 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 GSTM2P28161 218 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 SSR2P43308 183 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 CDH13P55290 713 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 SKP1P63208 163 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 PCDH1Q08174 1060 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 TRAF3Q13114 568 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 SLC13A2Q13183 592 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 LAPTM5Q13571 262 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 EXT1Q16394 746 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 SPINK14Q6IE38 97 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 TRMT10CQ7L0Y3 403 aaKnown RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 CCDC91Q7Z6B0 441 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 OR4N5Q8IXE1 308 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 FAM26EQ8N5C1 309 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 MZB1Q8WU39 189 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 HAS2Q92819 552 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 KCNC2Q96PR1 638 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 PITHD1Q9GZP4 211 aaPredicted RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 CDCP1Q9H5V8 836 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 SEMA4BQ9NPR2 832 aaPredicted RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 KLHL1Q9NR64 748 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 TMEM216Q9P0N5 145 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 TBK1Q9UHD2 729 aa11.76□□□□□ -0.53
CBX1-206ENST00000581003 PRRC2CQ9Y520 2896 aaKnown RBP11.76□□□□□ -0.53
CBX1-206ENST00000581003 TRBV11-1A0A0K0K1C0 115 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 A0A1W2PS29 197 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 GABRR3A8MPY1 467 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 ZNHIT1O43257 154 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 TMPRSS11DO60235 418 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 RPS17P08708 135 aaKnown RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 SNRPAP09012 282 aaKnown RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 HIST1H1TP22492 207 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 MST1P26927 711 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 CD96P40200 585 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 ARL1P40616 181 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 HIST2H2ACQ16777 129 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 TCHHL1Q5QJ38 904 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 C18orf63Q68DL7 685 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 HIST2H2AA3Q6FI13 130 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 NIPAL1Q6NVV3 410 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 ADGRD1Q6QNK2 874 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 DGAT2L6Q6ZPD8 337 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 ZNF227Q86WZ6 799 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 APCDD1LQ8NCL9 501 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 MDS2Q8NDY4 140 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 WDR20Q8TBZ3 569 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 FAR1Q8WVX9 515 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 HBEGFQ99075 208 aa11.75□□□□□ -0.53
CBX1-206ENST00000581003 NPLQ9BXD5 320 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 TSPAN10Q9H1Z9 355 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 FARSBQ9NSD9 589 aaKnown RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 ERRFI1Q9UJM3 462 aaPredicted RBP11.75□□□□□ -0.53
CBX1-206ENST00000581003 TRAV17A0A0B4J275 112 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 A0A1W2PPM1 405 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 GLOD5A6NK44 160 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SMIM23A6NLE4 172 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 HRKO00198 91 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 FGF17O60258 216 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 PRAMEF2O60811 474 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 NEURL1O76050 574 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 AGFG2O95081 481 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SCELO95171 688 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SLCO1A2P46721 670 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 KCNK10P57789 538 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SLAMF1Q13291 335 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 OR1C1Q15619 314 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SGO1Q5FBB7 561 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 DEPDC1Q5TB30 811 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 ZNF324BQ6AW86 544 aaPredicted RBP11.74□□□□□ -0.53
CBX1-206ENST00000581003 OR4C11Q6IEV9 310 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 LETMD1Q6P1Q0 360 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 OR4F6Q8NGB9 312 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
CBX1-206ENST00000581003 NCLNQ969V3 563 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 ANKRD9Q96BM1 317 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms