RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 ZNF354AO60765 605 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 HIST1H2AGP0C0S8 130 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 HIST1H2ADP20671 130 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 PEX19P40855 299 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 HK2P52789 917 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 BTN3A2P78410 334 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 DAZAP2Q15038 168 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 TOR1AIP1Q5JTV8 583 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 ANKRD22Q5VYY1 191 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 LRRC8EQ6NSJ5 796 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 PAQR3Q6TCH7 311 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 RTL4Q6ZR62 310 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 FAM47EQ6ZV65 393 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 CHSY3Q70JA7 882 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 KRTAP1-3Q8IUG1 177 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 SLC5A11Q8WWX8 675 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 HIST1H2AHQ96KK5 128 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 HIST1H2AJQ99878 128 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 H2AFJQ9BTM1 129 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 PRTFDC1Q9NRG1 225 aa17.69■□□□□ 0.42
NDEL1-209ENST00000580738 C20orf96Q9NUD7 363 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 TUBA8Q9NY65 449 aaPredicted RBP17.69■□□□□ 0.42
NDEL1-209ENST00000580738 TRGV5A0A0B4J1U4 118 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 A0A0G2JN53 185 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 MYOCOSA0A1B0GUC4 107 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 URADA6NGE7 173 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 FAM47E-STBD1D6RA91 191 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 CCL3P10147 92 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 BMP5P22003 454 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 RGS4P49798 205 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 HSD17B7P56937 341 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 REEP5Q00765 189 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 SLC13A2Q13183 592 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 BMPR2Q13873 1038 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 RBBP5Q15291 538 aaKnown RBP17.68■□□□□ 0.42
NDEL1-209ENST00000580738 HYAL4Q2M3T9 481 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 ARMC3Q5W041 872 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 FBXW10Q5XX13 1052 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 UGT3A1Q6NUS8 523 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 HSDL2Q6YN16 418 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 CLNKQ7Z7G1 428 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 MYO1HQ8N1T3 1032 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 ZNF321PQ8N8H1 164 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 NAXEQ8NCW5 288 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 TRPV3Q8NET8 790 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 LINGO1Q96FE5 620 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 EXO5Q9H790 373 aa17.68■□□□□ 0.42
NDEL1-209ENST00000580738 MAGEB16A2A368 324 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 SERPINA6P08185 405 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 GABRA1P14867 456 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 TACR1P25103 407 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 VPS41P49754 854 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 CDKN2DP55273 166 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 WNT3P56703 355 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 SARNPP82979 210 aaKnown RBP17.67■□□□□ 0.42
NDEL1-209ENST00000580738 FAM47BQ8NA70 645 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 RNASE6Q93091 150 aaKnown RBP17.67■□□□□ 0.42
NDEL1-209ENST00000580738 PLEKHF2Q9H8W4 249 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 ADAP2Q9NPF8 381 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 SACM1LQ9NTJ5 587 aa17.67■□□□□ 0.42
NDEL1-209ENST00000580738 SDR42E2A6NKP2 422 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 HSPB2A8KAH6 182 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 KDM4EB2RXH2 506 aaPredicted RBP17.66■□□□□ 0.42
NDEL1-209ENST00000580738 HCN1O60741 890 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 GUCA1CO95843 209 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 HEXAP06865 529 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 RFPL3SP0C7P2 107 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 SAT1P21673 171 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 PIGAP37287 484 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 MAGEA6P43360 314 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 ASCL1P50553 236 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 PGGT1BP53609 377 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 CCZ1BP86790 482 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 CCZ1P86791 482 aaPredicted RBP17.66■□□□□ 0.42
NDEL1-209ENST00000580738 ELAVL1Q15717 326 aaKnown RBP17.66■□□□□ 0.42
NDEL1-209ENST00000580738 HSPB2Q16082 182 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 HSP90AA5PQ58FG0 334 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 ULK2Q8IYT8 1036 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 AGGF1Q8N302 714 aaeCLIP17.66■□□□□ 0.42
NDEL1-209ENST00000580738 GOLM1Q8NBJ4 401 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 PTPMT1Q8WUK0 201 aaPredicted RBP17.66■□□□□ 0.42
NDEL1-209ENST00000580738 FBXL8Q96CD0 374 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 CAPZA3Q96KX2 299 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 TAS2R13Q9NYV9 303 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 ATG4BQ9Y4P1 393 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 CLCA3PQ9Y6N3 262 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 CSPG4Q6UVK1 2322 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 EML6Q6ZMW3 1958 aa17.66■□□□□ 0.42
NDEL1-209ENST00000580738 COL6A5A8TX70 2615 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 GOLGA8MH3BSY2 632 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 CLDN4O14493 209 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 NRDCO43847 1150 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 LY6G6DO95868 133 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 P04436 131 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 IFNA16P05015 189 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 GPS1Q13098 491 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 FBXL19-AS1Q494R0 122 aa17.65■□□□□ 0.42
NDEL1-209ENST00000580738 RBM20Q5T481 1227 aaKnown RBP17.65■□□□□ 0.42
NDEL1-209ENST00000580738 POMZP3Q6PJE2 187 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms