RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 OR1F2PQ96R84 312 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 MTERF1Q99551 399 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 MACROD1Q9BQ69 325 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 KLHL31Q9H511 634 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 CLMPQ9H6B4 373 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 PRDM7Q9NQW5 492 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 NMRK1Q9NWW6 199 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 AHSPQ9NZD4 102 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 HAO1Q9UJM8 370 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 PTRH2Q9Y3E5 179 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 NAALAD2Q9Y3Q0 740 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 PCDHGA9Q9Y5G4 932 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 BLACEA4D250 179 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 SYNDIG1LA6NDD5 238 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 C4orf51C9J302 202 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 MANBAO00462 879 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 FFAR3O14843 346 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 KLF11O14901 512 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 AZIN1O14977 448 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 GPR42O15529 346 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 CEACAM4O75871 244 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 TGFB1P01137 390 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PDYNP01213 254 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 IGHEP01854 428 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 STATHP02808 62 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PRPH2P23942 346 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 FOLR3P41439 243 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PGDP52209 483 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 RRADP55042 308 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 MTTPP55157 894 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 RPS13P62277 151 aaKnown RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 PPP2R2AP63151 447 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 OCA2Q04671 838 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 SRSF1Q07955 248 aaKnown RBP eCLIP9.33□□□□□ -0.92
GGA3-209ENST00000580646 ATP1A4Q13733 1029 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 DDX39BQ13838 428 aaKnown RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 CHI3L2Q15782 390 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 DEFB134Q4QY38 66 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 ARL13AQ5H913 290 aaPredicted RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 KANK2Q63ZY3 851 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 OR4C11Q6IEV9 310 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PRSS41Q7RTY9 318 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 TRIM46Q7Z4K8 759 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 UBE3DQ7Z6J8 389 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 MRGPREQ86SM8 312 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 CLYBLQ8N0X4 340 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 ZCCHC7Q8N3Z6 543 aaKnown RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 ANKRD42Q8N9B4 389 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 C7orf57Q8NEG2 295 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 OR51Q1Q8NH59 317 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 PPP1R14CQ8TAE6 165 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 STT3BQ8TCJ2 826 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 F2RL3Q96RI0 385 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 SPSB2Q99619 263 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 CCT7Q99832 543 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 ZNF717Q9BY31 904 aaPredicted RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 DDX31Q9H8H2 851 aaKnown RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 COPS7BQ9H9Q2 264 aaPredicted RBP9.33□□□□□ -0.92
GGA3-209ENST00000580646 LYRM4Q9HD34 91 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 MLXIPLQ9NP71 852 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 SIRT5Q9NXA8 310 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 ADAM29Q9UKF5 820 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 MAU2Q9Y6X3 613 aa9.33□□□□□ -0.92
GGA3-209ENST00000580646 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 A0A1W2PQ72 361 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 A6NL46 340 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 SGK494L7N484 410 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PEX12O00623 359 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PLPP1O14494 284 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 B3GALT2O43825 422 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 RDH16O75452 317 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 CRCPO75575 148 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 BMP10O95393 424 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ETHE1O95571 254 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 CHEK2O96017 543 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 UMODP07911 640 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ZGLP1P0C6A0 271 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 HIST1H1TP22492 207 aaPredicted RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 ATP5A1P25705 553 aaKnown RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 NEK2P51955 445 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 RAP1GDS1P52306 607 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PLA2G16P53816 162 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 GYS2P54840 703 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 FOXA1P55317 472 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 FOXL2P58012 376 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 RAB8AP61006 207 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ABCE1P61221 599 aaKnown RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
GGA3-209ENST00000580646 BTN3A2P78410 334 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ABRAXAS2Q15018 415 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 IGFBP7Q16270 282 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 AP5B1Q2VPB7 878 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 HSP90B2PQ58FF3 399 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 AP1ARQ63HQ0 302 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 ZCCHC23Q6ZST2 131 aa9.32□□□□□ -0.92
GGA3-209ENST00000580646 PAGE2Q7Z2X7 111 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms