RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PLA2G16P53816 162 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 MTTPP55157 894 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 RAB8AP61006 207 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 HMGCS1Q01581 520 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 ABHD18Q0P651 414 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 DSG2Q14126 1118 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 AP5B1Q2VPB7 878 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 DEFB134Q4QY38 66 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 PRAMEF17Q5VTA0 474 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 FAM219BQ5XKK7 198 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 ZNF517Q6ZMY9 492 aaPredicted RBP11.48□□□□□ -0.57
CCDC84-209ENST00000580556 Q6ZSR9 355 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 PAGE2Q7Z2X7 111 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 NUDT13Q86X67 352 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 PDSS2Q86YH6 399 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 DSELQ8IZU8 1212 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 SLC38A9Q8NBW4 561 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 OR2T11Q8NH01 316 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 ZCCHC10Q8TBK6 192 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 CHTF18Q8WVB6 975 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 NKD1Q969G9 470 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 MIB2Q96AX9 1013 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 CLIP3Q96DZ5 547 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 MAELQ96JY0 434 aaKnown RBP11.48□□□□□ -0.57
CCDC84-209ENST00000580556 PPP3R2Q96LZ3 170 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 QRFPRQ96P65 431 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 SERINC2Q96SA4 455 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 C17orf62Q9BQA9 187 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
CCDC84-209ENST00000580556 SLC7A5P2Q9GIP4 190 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 DDX31Q9H8H2 851 aaKnown RBP11.48□□□□□ -0.57
CCDC84-209ENST00000580556 LHX9Q9NQ69 397 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 DHCR7Q9UBM7 475 aaKnown RBP11.48□□□□□ -0.57
CCDC84-209ENST00000580556 NAALAD2Q9Y3Q0 740 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 PTGDR2Q9Y5Y4 395 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 USH1CQ9Y6N9 552 aa11.48□□□□□ -0.57
CCDC84-209ENST00000580556 MEN1O00255 615 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 B3GALT2O43825 422 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 RNF224P0DH78 156 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 KITP10721 976 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 PIM1P11309 404 aaPredicted RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 IL1RNP18510 177 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ITGAXP20702 1163 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ATP5A1P25705 553 aaKnown RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 LSP1P33241 339 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 BSGP35613 385 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 SSR2P43308 183 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 GSTM5P46439 218 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 UQCRFS1P47985 274 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 DCDP81605 110 aaKnown RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ACSM2AQ08AH3 577 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 NR6A1Q15406 480 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 NKAIN1Q4KMZ8 207 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ATP6AP1LQ52LC2 224 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ACSM2BQ68CK6 577 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 SCIMPQ6UWF3 145 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ZNF793Q6ZN11 406 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 MED25Q71SY5 747 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 COMMD6Q7Z4G1 85 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ESX1Q8N693 406 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ACOT4Q8N9L9 421 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 OR9A4Q8NGU2 314 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 ADAMTS18Q8TE60 1221 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 FKBP10Q96AY3 582 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 CHMP6Q96FZ7 201 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 FCRL1Q96LA6 429 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 C3orf30Q96M34 536 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 NUF2Q9BZD4 464 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 COPS7BQ9H9Q2 264 aaPredicted RBP11.47□□□□□ -0.57
CCDC84-209ENST00000580556 LRTM1Q9HBL6 345 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 LYRM4Q9HD34 91 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 FGFR1OP2Q9NVK5 253 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
CCDC84-209ENST00000580556 IGLV3-12A0A075B6K2 115 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 A0A0A6YYC8 382 aaPredicted RBP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 A0A0A6YYD5 115 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 I3L1I5 382 aaPredicted RBP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 SAP18O00422 153 aaKnown RBP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 SDHDO14521 159 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 POLR3GO15318 223 aaPredicted RBP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 NKX2-8O15522 239 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 ALBP02768 609 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 PCSK2P16519 638 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 AGXTP21549 392 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 IL10P22301 178 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 ALAS2P22557 587 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 CERS1P27544 350 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 TIA1P31483 386 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 GYS2P54840 703 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 MLLT10P55197 1068 aa11.46□□□□□ -0.57
CCDC84-209ENST00000580556 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.57
CCDC84-209ENST00000580556 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms