RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TFEBP19484 476 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 CRABP2P29373 138 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 STX2P32856 288 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 PTGS2P35354 604 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 PHEXP78562 749 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 BIKQ13323 160 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 RUNX2Q13950 521 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 TBCCQ15814 346 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 AP5B1Q2VPB7 878 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
GGA3-208ENST00000579743 ADPRMQ3LIE5 342 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 TMEM35AQ53FP2 167 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 ZNF468Q5VIY5 522 aaPredicted RBP12.79□□□□□ -0.36
GGA3-208ENST00000579743 RGS9BPQ6ZS82 235 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 LRRC70Q7Z2Q7 622 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 CCDC91Q7Z6B0 441 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 SIAH3Q8IW03 269 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 FAM47BQ8NA70 645 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 APCDD1LQ8NCL9 501 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 MORN4Q8NDC4 146 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 AGAP11Q8TF27 550 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 NCLNQ969V3 563 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 MTFMTQ96DP5 389 aaKnown RBP12.79□□□□□ -0.36
GGA3-208ENST00000579743 CD244Q9BZW8 370 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 CAB39LQ9H9S4 337 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 LYRM4Q9HD34 91 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 DAPP1Q9UN19 280 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 PPIEQ9UNP9 301 aaKnown RBP12.79□□□□□ -0.36
GGA3-208ENST00000579743 ANGPTL3Q9Y5C1 460 aa12.79□□□□□ -0.36
GGA3-208ENST00000579743 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 CDC40O60508 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
GGA3-208ENST00000579743 TPOP07202 933 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 CD1DP15813 335 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
GGA3-208ENST00000579743 LIM2P55344 173 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 PLGLB1Q02325 96 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 CHIT1Q13231 466 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 NAB1Q13506 487 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 DOC2AQ14183 400 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 ARHGAP11AQ6P4F7 1023 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 ABHD17CQ6PCB6 329 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 PDPRQ8NCN5 879 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 SPATA4Q8NEY3 305 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 OR14A16Q8NHC5 309 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 EXT2Q93063 718 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 WDR34Q96EX3 536 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 QRFPRQ96P65 431 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 MCMBPQ9BTE3 642 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 ALOXE3Q9BYJ1 711 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 OPTCQ9UBM4 332 aa12.78□□□□□ -0.36
GGA3-208ENST00000579743 PTBP2Q9UKA9 531 aaKnown RBP12.78□□□□□ -0.36
GGA3-208ENST00000579743 CCDC189A1A4V9 331 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CTAGE15A4D2H0 777 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 FAM159BA6NKW6 160 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 TAPBPO15533 448 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SUPT3HO75486 399 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SNRPB2P08579 225 aaKnown RBP12.77□□□□□ -0.37
GGA3-208ENST00000579743 PCNAP12004 261 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CERS1P27544 350 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 GRNP28799 593 aaKnown RBP12.77□□□□□ -0.37
GGA3-208ENST00000579743 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SSTR2P30874 369 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CASQ1P31415 396 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 MSH2P43246 934 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SSR2P43308 183 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 RAP1GDS1P52306 607 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 ADORA2A-AS1P86434 159 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 GK5Q6ZS86 529 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CLNKQ7Z7G1 428 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CTAGE6Q86UF2 777 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 PPM1NQ8N819 430 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 PSD4Q8NDX1 1056 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 OR8K3Q8NH51 312 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 C16orf52Q8NHV5 167 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 ASB5Q8WWX0 329 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 F2RL3Q96RI0 385 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 SMYD2Q9NRG4 433 aa12.77□□□□□ -0.37
GGA3-208ENST00000579743 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
GGA3-208ENST00000579743 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms