RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 IRF8Q02556 426 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 TGM3Q08188 693 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 SLC13A2Q13183 592 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 CHIT1Q13231 466 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 TRADDQ15628 312 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 C3AR1Q16581 482 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 MAPKAPK3Q16644 382 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 CMC1Q7Z7K0 106 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 SPPL2CQ8IUH8 684 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 LAS2Q8IYD9 372 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 FAM47BQ8NA70 645 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 POGLUT1Q8NBL1 392 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 FBF1Q8TES7 1133 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 TMEM125Q96AQ2 219 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 KCNC2Q96PR1 638 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 CSF3RQ99062 836 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 ROGDIQ9GZN7 287 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 ALG9Q9H6U8 611 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 LYRM4Q9HD34 91 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 IGSF5Q9NSI5 407 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 NPIPA1Q9UND3 350 aa21.28■■□□□ 1
CDKN2A-212ENST00000578845 ASNA1O43681 348 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 CTNSO60931 367 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 SCELO95171 688 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 ZNF24P17028 368 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 PPP2R1BP30154 601 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 GMPRP36959 345 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 SLMAPQ14BN4 828 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 EFTUD2Q15029 972 aaKnown RBP eCLIP21.27■■□□□ 1
CDKN2A-212ENST00000578845 ELAVL1Q15717 326 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 HIST2H2ACQ16777 129 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 RNFT1Q5M7Z0 435 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 SP5Q6BEB4 398 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 HIST2H2AA3Q6FI13 130 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 CCDC91Q7Z6B0 441 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 UBE3DQ7Z6J8 389 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 MRGPRGQ86SM5 289 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 TBC1D1Q86TI0 1168 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 CCDC25Q86WR0 208 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 CHERPQ8IWX8 916 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 GHDCQ8N2G8 530 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 CPSF7Q8N684 471 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 SRFBP1Q8NEF9 429 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 ZNF473Q8WTR7 871 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 UBE2E3Q969T4 207 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 NCLNQ969V3 563 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 F2RL3Q96RI0 385 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 MS4A8Q9BY19 250 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 TSPAN10Q9H1Z9 355 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 COPS7BQ9H9Q2 264 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 PNO1Q9NRX1 252 aaKnown RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 KCMF1Q9P0J7 381 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 TINAGQ9UJW2 476 aa21.27■■□□□ 1
CDKN2A-212ENST00000578845 KLF13Q9Y2Y9 288 aaPredicted RBP21.27■■□□□ 1
CDKN2A-212ENST00000578845 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.27■■□□□ 1
CDKN2A-212ENST00000578845 CCDC189A1A4V9 331 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 LTA4HP09960 611 aaKnown RBP21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 AGAP20933 346 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 SERPINB1P30740 379 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 TMEM35AQ53FP2 167 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 SYT10Q6XYQ8 523 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 BNC2Q6ZN30 1099 aaPredicted RBP21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 RAPH1Q70E73 1250 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 EXT2Q93063 718 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 MARVELD3Q96A59 401 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 TBCDQ9BTW9 1192 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 SH3BGRL2Q9UJC5 107 aa21.26■□□□□ 0.99
CDKN2A-212ENST00000578845 ADGRG4Q8IZF6 3080 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 K7EPI3 171 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 ITGA10O75578 1167 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 FBN2P35556 2912 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 MSH2P43246 934 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 ADORA2A-AS1P86434 159 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 XKRXQ6PP77 449 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 ZNF793Q6ZN11 406 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 C17orf53Q8N3J3 647 aaPredicted RBP21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 TMEM132CQ8N3T6 1108 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 RHEBL1Q8TAI7 183 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 VTI1BQ9UEU0 232 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 FBXW2Q9UKT8 454 aa21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 YARS2Q9Y2Z4 477 aaKnown RBP21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 NCOA6Q14686 2063 aaPredicted RBP21.25■□□□□ 0.99
CDKN2A-212ENST00000578845 TMEM200CA6NKL6 621 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 UBXN8O00124 270 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 PRKNO60260 465 aaPredicted RBP21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 ZFAND5O76080 213 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 MTHFD2P13995 350 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 ATP5A1P25705 553 aaKnown RBP21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 CLNKQ7Z7G1 428 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 GPALPP1Q8IXQ4 340 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 CENPLQ8N0S6 344 aaPredicted RBP21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 CYP4Z2PQ8N1L4 340 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 MORN4Q8NDC4 146 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 OR7G3Q8NG95 312 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 DAZLQ92904 295 aaKnown RBP21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 CCDC77Q9BR77 488 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 ZDHHC18Q9NUE0 388 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 OPTCQ9UBM4 332 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 ACOT9Q9Y305 439 aa21.24■□□□□ 0.99
CDKN2A-212ENST00000578845 PCNX1Q96RV3 2341 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms