RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CCDC6Q16204 474 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 MUM1Q2TAK8 710 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 DEFB134Q4QY38 66 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 CLECL1Q8IZS7 167 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 MMP21Q8N119 569 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF285Q96NJ3 590 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 ALG2Q9H553 416 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 TAS2R7Q9NYW3 318 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 KLHL3Q9UH77 587 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 PHF11Q9UIL8 331 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 CABIN1Q9Y6J0 2220 aa17.6■□□□□ 0.41
PRKCA-203ENST00000578063 C1orf226A1L170 272 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 CPED1A4D0V7 1026 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 HCRTR1O43613 425 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 ZCCHC18P0CG32 403 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 GABRA4P48169 554 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 MTPNP58546 118 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 CFHR1Q03591 330 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 LIPEQ05469 1076 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 TRAP1Q12931 704 aaKnown RBP17.59■□□□□ 0.41
PRKCA-203ENST00000578063 FLOT2Q14254 428 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 PRTGQ2VWP7 1150 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 GTDC1Q4AE62 458 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 LAIR1Q6GTX8 287 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 DGLUCYQ7Z3D6 616 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 KMT5CQ86Y97 462 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 FAM156AQ8NDB6 213 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 STMN2Q93045 179 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 PHF12Q96QT6 1004 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 SMOC1Q9H4F8 434 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 PCDHGB4Q9UN71 923 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 ATG4BQ9Y4P1 393 aa17.59■□□□□ 0.41
PRKCA-203ENST00000578063 NVLO15381 856 aaKnown RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 PDPK1O15530 556 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 BCAS2O75934 225 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 STAMBPO95630 424 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 CPSF4O95639 269 aaKnown RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 ATP6V1G2O95670 118 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 ARL4DP49703 201 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 GSK3BP49841 420 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 DUSP3P51452 185 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 HSD11B2P80365 405 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 MPEG1Q2M385 716 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 INAVAQ3KP66 663 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 TCTE1Q5JU00 501 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 PLA2G2CQ5R387 149 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 USP53Q70EK8 1073 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 OR4A15Q8NGL6 344 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 GOT1L1Q8NHS2 421 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 CIDECQ96AQ7 238 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 KCTD14Q9BQ13 255 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 CPPED1Q9BRF8 314 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 THUMPD3Q9BV44 507 aaKnown RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 TRIM8Q9BZR9 551 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 RASSF4Q9H2L5 321 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 MUC13Q9H3R2 512 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 SLC6A13Q9NSD5 602 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 DNAAF2Q9NVR5 837 aaKnown RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF282Q9UDV7 671 aaPredicted RBP17.58■□□□□ 0.41
PRKCA-203ENST00000578063 FBXW2Q9UKT8 454 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 VPS4AQ9UN37 437 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 PCDHGB2Q9Y5G2 931 aa17.58■□□□□ 0.41
PRKCA-203ENST00000578063 A0A1W2PR48 441 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 A0A1W2PRB8 838 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 ACOT8O14734 319 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 TOX3O15405 576 aaPredicted RBP17.58■□□□□ 0.4
PRKCA-203ENST00000578063 AIFM1O95831 613 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 LMNAP02545 664 aaKnown RBP17.58■□□□□ 0.4
PRKCA-203ENST00000578063 GSNP06396 782 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 CKMT1AP12532 417 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 BUD31P41223 144 aaPredicted RBP17.58■□□□□ 0.4
PRKCA-203ENST00000578063 SKP1P63208 163 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 SELPLGQ14242 412 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 NDUFA9Q16795 377 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 PROX2Q3B8N5 592 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 PERM1Q5SV97 790 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 NIPAL1Q6NVV3 410 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 ZNF621Q6ZSS3 439 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 N4BP2L2Q92802 583 aaPredicted RBP17.58■□□□□ 0.4
PRKCA-203ENST00000578063 MAPKAP1Q9BPZ7 522 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 ECSITQ9BQ95 431 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 LYRM4Q9HD34 91 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 MS4A12Q9NXJ0 267 aa17.58■□□□□ 0.4
PRKCA-203ENST00000578063 MRPS2Q9Y399 296 aaKnown RBP17.58■□□□□ 0.4
PRKCA-203ENST00000578063 ARID1BQ8NFD5 2236 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 PROM1O43490 865 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 GALR3O60755 368 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 C6orf47O95873 294 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 NR2F6P10588 404 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 EFNA1P20827 205 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 PPIBP23284 216 aaKnown RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 MSX2P35548 267 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 FRKP42685 505 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 DAB2P98082 770 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 MS4A2Q01362 244 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 TNFRSF17Q02223 184 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 GARNL3Q5VVW2 1013 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 TCEAL6Q6IPX3 200 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 TMEM71Q6P5X7 295 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 ARHGEF39Q8N4T4 335 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms