RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 SMIM10Q96HG1 83 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 IP6K3Q96PC2 410 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 F2RL3Q96RI0 385 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 SPSB2Q99619 263 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 ELAC2Q9BQ52 826 aaKnown RBP16.9■□□□□ 0.3
CLDN7-208ENST00000575313 SIKE1Q9BRV8 207 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 REXO4Q9GZR2 422 aaKnown RBP16.9■□□□□ 0.3
CLDN7-208ENST00000575313 WDR55Q9H6Y2 383 aaPredicted RBP16.9■□□□□ 0.3
CLDN7-208ENST00000575313 KCNK13Q9HB14 408 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 RIC8BQ9NVN3 520 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 NMRK1Q9NWW6 199 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 VPS29Q9UBQ0 182 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 POLHQ9Y253 713 aa16.9■□□□□ 0.3
CLDN7-208ENST00000575313 A0A088AWK7 358 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 GOLGA8QA0A0J9YX86 632 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 GOLGA8OA6NCC3 632 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 GOLGA8NF8WBI6 632 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 SGK494L7N484 410 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 DIAPH2O60879 1101 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 ZGLP1P0C6A0 271 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 ZNF10P21506 573 aaPredicted RBP16.89■□□□□ 0.29
CLDN7-208ENST00000575313 HNRNPH1P31943 449 aaKnown RBP16.89■□□□□ 0.29
CLDN7-208ENST00000575313 IDH3AP50213 366 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 RAB8AP61006 207 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 SNRPNP63162 240 aaKnown RBP16.89■□□□□ 0.29
CLDN7-208ENST00000575313 CUL3Q13618 768 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 TMEM35AQ53FP2 167 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 SPDYAQ5MJ70 313 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 KHDRBS2Q5VWX1 349 aaKnown RBP16.89■□□□□ 0.29
CLDN7-208ENST00000575313 TRIM40Q6P9F5 258 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 SRFBP1Q8NEF9 429 aaKnown RBP16.89■□□□□ 0.29
CLDN7-208ENST00000575313 OR2L5Q8NG80 312 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 TUBGCP3Q96CW5 907 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 MS4A6EQ96DS6 147 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 AICDAQ9GZX7 198 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 KLHL31Q9H511 634 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 KLHL14Q9P2G3 628 aa16.89■□□□□ 0.29
CLDN7-208ENST00000575313 A0A0G2JND7 137 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 SAP18O00422 153 aaKnown RBP16.88■□□□□ 0.29
CLDN7-208ENST00000575313 ERI3O43414 337 aaKnown RBP16.88■□□□□ 0.29
CLDN7-208ENST00000575313 PEX11AO75192 247 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 VPS4BO75351 444 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 RDH16O75452 317 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 RSL1D1O76021 490 aaKnown RBP16.88■□□□□ 0.29
CLDN7-208ENST00000575313 IGHEP01854 428 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 IL10P22301 178 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 EPHA3P29320 983 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 CBX1P83916 185 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 MAT1AQ00266 395 aaKnown RBP16.88■□□□□ 0.29
CLDN7-208ENST00000575313 NR6A1Q15406 480 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 FAM69BQ5VUD6 431 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 ADAMTS17Q8TE56 1095 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 RGMAQ96B86 450 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 EBF4Q9BQW3 602 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 CENPKQ9BS16 269 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 TMEM120AQ9BXJ8 343 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 SOX17Q9H6I2 414 aaPredicted RBP16.88■□□□□ 0.29
CLDN7-208ENST00000575313 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 SEMA3GQ9NS98 782 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 HCN3Q9P1Z3 774 aa16.88■□□□□ 0.29
CLDN7-208ENST00000575313 CFAP47Q6ZTR5 3102 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 NPIPB8E9PQR5 432 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 LSM1O15116 133 aaKnown RBP16.87■□□□□ 0.29
CLDN7-208ENST00000575313 SEC22BO75396 215 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 UMODP07911 640 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 FURINP09958 794 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 PRPH2P23942 346 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 MMP11P24347 488 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 OTX2P32243 289 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 RAP1GDS1P52306 607 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 ARFIP2P53365 341 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 BTN3A2P78410 334 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 KLC1Q07866 573 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 TBL3Q12788 808 aaKnown RBP16.87■□□□□ 0.29
CLDN7-208ENST00000575313 SYT16Q17RD7 645 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 AP5B1Q2VPB7 878 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 DEFB109BQ30KR1 87 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 GALNTL6Q49A17 601 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 VWA2Q5GFL6 755 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 NXNQ6DKJ4 435 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 BORAQ6PGQ7 559 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 LARP4Q71RC2 724 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLDN7-208ENST00000575313 SPATA21Q7Z572 469 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 UBE3DQ7Z6J8 389 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 ZC3H7AQ8IWR0 971 aaKnown RBP16.87■□□□□ 0.29
CLDN7-208ENST00000575313 ACTRT2Q8TDY3 377 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 CHTF18Q8WVB6 975 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 APIPQ96GX9 242 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 VPS50Q96JG6 964 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 MAELQ96JY0 434 aaKnown RBP16.87■□□□□ 0.29
CLDN7-208ENST00000575313 PPP3R2Q96LZ3 170 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 KCNC2Q96PR1 638 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 OR52B2Q96RD2 323 aa16.87■□□□□ 0.29
CLDN7-208ENST00000575313 CRB3Q9BUF7 120 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms