RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ASB4Q9Y574 426 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 CROCCQ5TZA2 2017 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SVILO95425 2214 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 NCOA6Q14686 2063 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 ADGRG4Q8IZF6 3080 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 SPTBN1Q01082 2364 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 MAST4O15021 2626 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 CELSR2Q9HCU4 2923 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 IQANK1A0A1B0GTG1 560 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 EIF4E1BA6NMX2 242 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 FOXE1O00358 373 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 SAP18O00422 153 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 SH3BGRLO75368 114 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 SEMA3DO95025 777 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TGFB1P01137 390 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 CLPSP04118 112 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 GSTA1P08263 222 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 CREB1P16220 341 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TPP2P29144 1249 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 TSFMP43897 325 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 NEK2P51955 445 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ARFIP1P53367 373 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 PRKAA2P54646 552 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 MTTPP55157 894 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 CDH13P55290 713 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 FOXA1P55317 472 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TBL3Q12788 808 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 CUL3Q13618 768 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 PCLAFQ15004 111 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TERF2Q15554 542 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 IGFBP7Q16270 282 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 CPSF6Q16630 551 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMG6-216ENST00000575176 PAGE2BQ5JRK9 111 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 CES4AQ5XG92 561 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ZNF324BQ6AW86 544 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 NIPAL1Q6NVV3 410 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 KLC3Q6P597 504 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TRIM40Q6P9F5 258 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 DGAT2L6Q6ZPD8 337 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 KBTBD2Q8IY47 623 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TBC1D19Q8N5T2 526 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 SIRT6Q8N6T7 355 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 OR6Y1Q8NGX8 325 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 AGAP11Q8TF27 550 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 UBLCP1Q8WVY7 318 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 UCN3Q969E3 161 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ANKRD9Q96BM1 317 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 C19orf60Q96EN9 201 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 KCNC2Q96PR1 638 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ZNF382Q96SR6 550 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 MFRPQ9BY79 579 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 DDX31Q9H8H2 851 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 LYRM4Q9HD34 91 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 MMP25Q9NPA2 562 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 SEMA4BQ9NPR2 832 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TEX10Q9NXF1 929 aaPredicted RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 PSD3Q9NYI0 1048 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TMCO1Q9UM00 188 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 B3GNT3Q9Y2A9 372 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 TNPO3Q9Y5L0 923 aaKnown RBP8.12□□□□□ -1.11
SMG6-216ENST00000575176 DCHS2Q6V1P9 2916 aa8.12□□□□□ -1.11
SMG6-216ENST00000575176 ESPL1Q14674 2120 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CSMD1Q96PZ7 3565 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 URADA6NGE7 173 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ANKDD1BA6NHY2 528 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 WASHC1A8K0Z3 465 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FGF17O60258 216 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 DPM1O60762 260 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
SMG6-216ENST00000575176 B4GALT2O60909 372 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CDH16O75309 829 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 GLRA3O75311 464 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 WISP2O76076 250 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 WISP1O95388 367 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CLDN9O95484 217 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 DDAH2O95865 285 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 RNF224P0DH78 156 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 PCNAP12004 261 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 JAK1P23458 1154 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ATP5F1P24539 256 aaPredicted RBP8.11□□□□□ -1.11
SMG6-216ENST00000575176 CRHR1P34998 444 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TNFSF10P50591 281 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TDGF1P3P51864 188 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 HSD17B7P56937 341 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CLCQ05315 142 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 DDX39BQ13838 428 aaKnown RBP8.11□□□□□ -1.11
SMG6-216ENST00000575176 NSDHLQ15738 373 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TMEM35AQ53FP2 167 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FRG2Q64ET8 278 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 C18orf63Q68DL7 685 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FCRLBQ6BAA4 426 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ZYG11AQ6WRX3 759 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FRMD7Q6ZUT3 714 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CRLF3Q8IUI8 442 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms