RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CATSPEREQ5SY80 951 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 GTF2H2CQ6P1K8 395 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 METTL2BQ6P1Q9 378 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 PRSS41Q7RTY9 318 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 VN1R4Q7Z5H5 301 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 CPEB2Q7Z5Q1 589 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 MRGPRGQ86SM5 289 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF808Q8N4W9 903 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 AIF1LQ9BQI0 150 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 PELI2Q9HAT8 420 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 TEKT2Q9UIF3 430 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 SH3BGRL2Q9UJC5 107 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 ASB1Q9Y576 335 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 A8MUI8 341 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 WISP2O76076 250 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 SUPT7LO94864 414 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 CYC1P08574 325 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 C1GALT1C1LP0DN25 315 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 POU3F2P20265 443 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 PRKAA2P54646 552 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 CSNK1G2P78368 415 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 MEF2AQ02078 507 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 RBPJQ06330 500 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 ASPHQ12797 758 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 HIST2H2ACQ16777 129 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 BTBD16Q32M84 506 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 MINDY4Q4G0A6 757 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 XKR6Q5GH73 641 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF766Q5HY98 468 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 MFSD4BQ5TF39 518 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 HIST2H2AA3Q6FI13 130 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 MTFR2Q6P444 385 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 NXPE4Q6UWF7 544 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 BNC2Q6ZN30 1099 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 OR51Q1Q8NH59 317 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 ARL8AQ96BM9 186 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 C19orf25Q9UFG5 118 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 FBN2P35556 2912 aa13.92□□□□□ -0.18
NPLOC4-207ENST00000572346 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 NCOA6Q14686 2063 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 KCNE1BA0A087WTH5 132 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 OR2W5A6NFC9 320 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 G3V2L1 256 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 TM9SF1O15321 606 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 TYROBPO43914 113 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 SASH3O75995 380 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 IL1RNP18510 177 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 IMPDH1P20839 514 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 HTR1EP28566 365 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 XCR1P46094 333 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 RPS15AP62244 130 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 HERVK_113P63132 956 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 CHIT1Q13231 466 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 RBBP5Q15291 538 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF630Q2M218 657 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 PAGE2BQ5JRK9 111 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 CFAP157Q5JU67 520 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ACER2Q5QJU3 275 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 FCRLBQ6BAA4 426 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 H3F3CQ6NXT2 135 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 RPTNQ6XPR3 784 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 MYLK4Q86YV6 388 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 BEST3Q8N1M1 668 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 KRT78Q8N1N4 520 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 TLCD1Q96CP7 247 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ATP6V1G3Q96LB4 118 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF354BQ96LW1 612 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 MACROD1Q9BQ69 325 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ERVK-6Q9BXR3 956 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 CHST11Q9NPF2 352 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 SEMA4BQ9NPR2 832 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 HCN3Q9P1Z3 774 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 PDZD2O15018 2839 aa13.91□□□□□ -0.18
NPLOC4-207ENST00000572346 FEZF1A0PJY2 475 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 SGK494L7N484 410 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 OR1F1O43749 312 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 SLC19A2O60779 497 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 ZWINTO95229 277 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 NEFHP12036 1026 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 PTGER4P35408 488 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 BCL6P41182 706 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 CCNG1P51959 295 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 CDH13P55290 713 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 NAA20P61599 178 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 LAPTM5Q13571 262 aa13.9□□□□□ -0.18
NPLOC4-207ENST00000572346 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms