RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 F5H5T6 163 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 H0Y626 953 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 K7EQS6 105 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ACSL4O60488 711 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SYNCRIPO60506 623 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 ZNF217O75362 1048 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NDUFS3O75489 264 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SLC22A3O75751 556 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 GRAP2O75791 330 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 KLF8O95600 359 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 PENKP01210 267 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 CALCAP01258 141 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 IGLV3-27P01718 113 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 FYNP06241 537 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 MYBL1P10243 752 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 KRT3P12035 628 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 GZMAP12544 262 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 PAX1P15863 534 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 PDGFRAP16234 1089 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 CDH2P19022 906 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 POLR2EP19388 210 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 SDC4P31431 198 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 CDKN1AP38936 164 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NNMTP40261 264 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 OPRD1P41143 372 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ST8SIA6P61647 398 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 MPP1Q00013 466 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 KDSRQ06136 332 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NIPAL4Q0D2K0 466 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 KLHL30Q0D2K2 578 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NME3Q13232 169 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SIM2Q14190 667 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 DMC1Q14565 340 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 CCDC6Q16204 474 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SLC25A52Q3SY17 297 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 BRMS1LQ5PSV4 323 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SYPL2Q5VXT5 272 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ZNF449Q6P9G9 518 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 DCUN1D2Q6PH85 259 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 Q6ZS52 159 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 FAM183BPQ6ZVS7 135 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 APTXQ7Z2E3 356 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 TSPAN33Q86UF1 283 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 PHF13Q86YI8 300 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 DEFB106AQ8N104 65 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ALLCQ8N6M5 410 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ZBTB44Q8NCP5 570 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 OR1J2Q8NGS2 313 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 DQX1Q8TE96 717 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 SLC38A5Q8WUX1 472 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 TMEM255BQ8WV15 326 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NDRG1Q92597 394 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 ALG14Q96F25 216 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 PGAP3Q96FM1 320 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 SCRN2Q96FV2 425 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 C1orf74Q96LT6 269 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NCAPGQ9BPX3 1015 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 FUCA2Q9BTY2 467 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 GANQ9H2C0 597 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 HSD3B7Q9H2F3 369 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 POLR1BQ9H9Y6 1135 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 MRPL47Q9HD33 250 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 PARVAQ9NVD7 372 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 AIPL1Q9NZN9 384 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ADAM22Q9P0K1 906 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 COX16Q9P0S2 106 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 IFNKQ9P0W0 207 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 TAAR2Q9P1P5 351 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 COPG2Q9UBF2 871 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NOCTQ9UK39 431 aaKnown RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 GMEB2Q9UKD1 530 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 MMP17Q9ULZ9 603 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 TMEM184BQ9Y519 407 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 PTPRDP23468 1912 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 ITIH6Q6UXX5 1313 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 GREB1Q4ZG55 1949 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 FAM237BA0A1B0GVD1 139 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SIGLEC16A6NMB1 481 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 B4E171 279 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 GOLGA8SH3BPF8 625 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 J3KRW8 73 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SCAMP1O15126 338 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 EPHB6O15197 1021 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SYNGR3O43761 229 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 TBL1XO60907 577 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 RNASEH1O60930 286 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 CLDN11O75508 207 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 RHOBTB1O94844 696 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 LUC7L3O95232 432 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 MOCS2O96007 188 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 IGLV3-25P01717 112 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 IGHV4-39P01824 125 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 SERPING1P05155 500 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 EIF2S1P05198 315 aaKnown RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 PNMA6AP0CW24 399 aaPredicted RBP3.76□□□□□ -1.81
NUP88-202ENST00000570937 ACADMP11310 421 aa3.76□□□□□ -1.81
NUP88-202ENST00000570937 OXTRP30559 389 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms