RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZCCHC14Q8WYQ9 949 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 MRGPRFQ96AM1 343 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAF2Q96CS3 445 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KLHL29Q96CT2 875 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CLPTM1LQ96KA5 538 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 EGLN2Q96KS0 407 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 LINC00615Q96LM1 132 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 PPP1R36Q96LQ0 422 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 C9orf72Q96LT7 481 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ZNF48Q96MX3 618 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 WDFY2Q96P53 400 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RNF157Q96PX1 679 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FMO2Q99518 471 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CCDC28BQ9BUN5 200 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ANGPTL4Q9BY76 406 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CEP41Q9BYV8 373 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GRIP2Q9C0E4 1043 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ATG10Q9H0Y0 220 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GBA3Q9H227 469 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TTYH1Q9H313 450 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 UBQLN3Q9H347 655 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CDC42EP4Q9H3Q1 356 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 TPK1Q9H3S4 243 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 POFUT1Q9H488 388 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FBXO44Q9H4M3 255 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM124BQ9H5Z6 455 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 CCDC134Q9H6E4 229 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PLEKHA2Q9HB19 425 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GLOD4Q9HC38 313 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CSNK1G1Q9HCP0 422 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MMP25Q9NPA2 562 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 C19orf12Q9NSK7 152 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TDP1Q9NUW8 608 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 EXD2Q9NVH0 621 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ALKBH4Q9NXW9 302 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GALNT8Q9NY28 637 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NDUFA13Q9P0J0 144 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ATXN10Q9UBB4 475 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CTNNAL1Q9UBT7 734 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MAGEL2Q9UJ55 1249 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MID2Q9UJV3 735 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RAB23Q9ULC3 237 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RPL26L1Q9UNX3 145 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 PLA2G4CQ9UP65 541 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ERGIC3Q9Y282 383 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KCTD3Q9Y597 815 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 HEY1Q9Y5J3 304 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FADS3Q9Y5Q0 445 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 LOC102723996A0A087X1L8 192 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 A0A0A6YYC8 382 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 TRAV25A0A0B4J276 109 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 EDDM13A0A1B0GTR0 161 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 BCLAF3A2AJT9 711 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 WDR27A2RRH5 827 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MTMR11A4FU01 709 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OR14I1A6ND48 311 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 EFCAB10A6NFE3 127 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SH2D7A6NKC9 451 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 E5RI56 91 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PRSS44E7EML9 344 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 E7ESA3 106 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 I3L1I5 382 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 APOC4-APOC2K7ER74 178 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ITGB1BP1O14713 200 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PPM1DO15297 605 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 INSIG1O15503 277 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ZNF208O43345 1280 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SPRY1O43609 319 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 NDUFA2O43678 99 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 AKAP8O43823 692 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 MGRN1O60291 552 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 HCN1O60741 890 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 NDUFS6O75380 124 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 VPS26AO75436 327 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 LEFTY1O75610 366 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ZFPL1O95159 310 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OAZ2O95190 189 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SEC24AO95486 1093 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ACSL3O95573 720 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ZBTB11O95625 1053 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 EFEMP2O95967 443 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 IGLV3-25P01717 112 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 APOC2P02655 101 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 LCATP04180 440 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 LYNP07948 512 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 RHOP08100 348 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 F7P08709 466 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 NUDT17P0C025 328 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 G6PDP11413 515 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 BMP2P12643 396 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CYP4B1P13584 511 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CREB1P16220 341 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TNNI3P19429 210 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ACHEP22303 614 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 FGFR3P22607 806 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TUBG1P23258 451 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 DGKAP23743 735 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ITGA3P26006 1051 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PIK3R1P27986 724 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms