RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 RNF32Q9H0A6 362 aa16.91■□□□□ 0.3
LITAF-204ENST00000570798 CLMPQ9H6B4 373 aa16.91■□□□□ 0.3
LITAF-204ENST00000570798 PRTFDC1Q9NRG1 225 aa16.91■□□□□ 0.3
LITAF-204ENST00000570798 DCDC2Q9UHG0 476 aa16.91■□□□□ 0.3
LITAF-204ENST00000570798 MRPS33Q9Y291 106 aaKnown RBP16.91■□□□□ 0.3
LITAF-204ENST00000570798 PCDHGA10Q9Y5H3 936 aa16.91■□□□□ 0.3
LITAF-204ENST00000570798 A0A1B0GTL3 188 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 SAGE2PA6NJ88 616 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 FOXO6A8MYZ6 492 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 ESPNB1AK53 854 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 FOXE1O00358 373 aaPredicted RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 SAP18O00422 153 aaKnown RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 CLDN4O14493 209 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 PLPP1O14494 284 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 DLX3O60479 287 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 TAC1P20366 129 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 PTX3P26022 381 aaPredicted RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 HERVK_113P63132 956 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 CUL3Q13618 768 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 UNC50Q53HI1 259 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 ARMC2Q8NEN0 867 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 OR4F6Q8NGB9 312 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 RGMAQ96B86 450 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 MAPKAP1Q9BPZ7 522 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 ERVK-6Q9BXR3 956 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 ZNF717Q9BY31 904 aaPredicted RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 KCNK13Q9HB14 408 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 SEMA4BQ9NPR2 832 aaPredicted RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 EMCNQ9ULC0 261 aa16.9■□□□□ 0.3
LITAF-204ENST00000570798 SPENQ96T58 3664 aaKnown RBP16.9■□□□□ 0.3
LITAF-204ENST00000570798 DYTNA2CJ06 578 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 PPP6CO00743 305 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 CTNSO60931 367 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ETHE1O95571 254 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ATP5F1P24539 256 aaPredicted RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 SSR2P43308 183 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 SLCO1A2P46721 670 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 NEK2P51955 445 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 CDH13P55290 713 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 PHEXP78562 749 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 RCN2Q14257 317 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ZNF169Q14929 603 aaPredicted RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 TLR1Q15399 786 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ZNF678Q5SXM1 525 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 MILR1Q7Z6M3 343 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ZCCHC7Q8N3Z6 543 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 EPS8L3Q8TE67 593 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 AENQ8WTP8 325 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 BARD1Q99728 777 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 NPAS2Q99743 824 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 SORBS1Q9BX66 1292 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 PLA2G3Q9NZ20 509 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 STMN3Q9NZ72 180 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 TEKT2Q9UIF3 430 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 ZNF225Q9UK10 706 aa16.89■□□□□ 0.29
LITAF-204ENST00000570798 PPIEQ9UNP9 301 aaKnown RBP16.89■□□□□ 0.29
LITAF-204ENST00000570798 A8MUI8 341 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 WDPCPO95876 746 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 OTCP00480 354 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 IMPDH1P20839 514 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 BSGP35613 385 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 TNFSF10P50591 281 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 RAP1GDS1P52306 607 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 ARG2P78540 354 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 CLCQ05315 142 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 ZNF33BQ06732 778 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 SLC13A2Q13183 592 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 TERF2Q15554 542 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 C10orf62Q5T681 223 aaPredicted RBP16.88■□□□□ 0.29
LITAF-204ENST00000570798 ABHD17BQ5VST6 288 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 FRG2Q64ET8 278 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 RPUSD3Q6P087 351 aaKnown RBP16.88■□□□□ 0.29
LITAF-204ENST00000570798 CRLF3Q8IUI8 442 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 CISD2Q8N5K1 135 aaKnown RBP16.88■□□□□ 0.29
LITAF-204ENST00000570798 EFCAB3Q8N7B9 438 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 GALNT11Q8NCW6 608 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 MYRIPQ8NFW9 859 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 C19orf60Q96EN9 201 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 ZNF354BQ96LW1 612 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 MAGEB10Q96LZ2 347 aaPredicted RBP16.88■□□□□ 0.29
LITAF-204ENST00000570798 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 FRG2BQ96QU4 278 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 CENPKQ9BS16 269 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 DDX31Q9H8H2 851 aaKnown RBP16.88■□□□□ 0.29
LITAF-204ENST00000570798 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
LITAF-204ENST00000570798 BLACEA4D250 179 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 SYNDIG1LA6NDD5 238 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 A8MUA0 341 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 CDH16O75309 829 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 GLRA3O75311 464 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 SUPT7LO94864 414 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 NUDT17P0C025 328 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 KRT15P19012 456 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 TSPAN8P19075 237 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 PPP2R1BP30154 601 aa16.87■□□□□ 0.29
LITAF-204ENST00000570798 ARL1P40616 181 aaPredicted RBP16.87■□□□□ 0.29
LITAF-204ENST00000570798 PRKAA2P54646 552 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms