RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 FAM46CQ5VWP2 391 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 SHEQ5VZ18 495 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 FAM91A1Q658Y4 838 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 NUFIP2Q7Z417 695 aaKnown RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 MEX3DQ86XN8 651 aaKnown RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 FER1L6-AS2Q96M78 137 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 RAB3IPQ96QF0 476 aaPredicted RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 DPEP2Q9H4A9 486 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 MRGBPQ9NV56 204 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 NOCTQ9UK39 431 aaKnown RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 SALL1Q9NSC2 1324 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 HTR3EA5X5Y0 456 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 IGLON5A6NGN9 336 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 E2F3O00716 465 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 P2RX6O15547 441 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 SP9P0CG40 484 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 MATKP42679 507 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 SLC1A3P43003 542 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 BACE1P56817 501 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 BTG1P62324 171 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 NAAAQ02083 359 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 CYLC2Q14093 348 aaPredicted RBP2.32□□□□□ -2.04
UBR1-209ENST00000569243 ECSCRQ19T08 205 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 TMEM44Q2T9K0 475 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 HERC4Q5GLZ8 1057 aaPredicted RBP2.32□□□□□ -2.04
UBR1-209ENST00000569243 C4orf19Q8IY42 314 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 CLEC1AQ8NC01 280 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 FLVCR1-AS1Q8TAF5 88 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 HEXDCQ8WVB3 486 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 ERO1AQ96HE7 468 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 RUNDC3BQ96NL0 473 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 OR10A4Q9H209 315 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 PNNQ9H307 717 aaKnown RBP2.32□□□□□ -2.04
UBR1-209ENST00000569243 PFDN4Q9NQP4 134 aa2.32□□□□□ -2.04
UBR1-209ENST00000569243 FOXI3A8MTJ6 420 aaPredicted RBP2.31□□□□□ -2.04
UBR1-209ENST00000569243 ZNF732B4DXR9 585 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 ANHXE9PGG2 379 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 PLOD3O60568 738 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 DIAPH2O60879 1101 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CLN5O75503 358 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 VENTXO95231 258 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 LDHCP07864 332 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CETN1Q12798 172 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 GPR50Q13585 617 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 PCK2Q16822 640 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 TIMM50Q3ZCQ8 353 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 ARMCX5Q6P1M9 558 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 RFPL4BQ6ZWI9 263 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 NLRP14Q86W24 1093 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CREBRFQ8IUR6 639 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 TBC1D10CQ8IV04 446 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 ELMOD1Q8N336 334 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 SLC43A2Q8N370 569 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CCDC191Q8NCU4 936 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 LIPHQ8WWY8 451 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 RIT1Q92963 219 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CNDP2Q96KP4 475 aaKnown RBP2.31□□□□□ -2.04
UBR1-209ENST00000569243 ANKRD27Q96NW4 1050 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 RCHY1Q96PM5 261 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 TNFRSF13CQ96RJ3 184 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 PRMT1Q99873 361 aaKnown RBP2.31□□□□□ -2.04
UBR1-209ENST00000569243 HSD17B14Q9BPX1 270 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CUTCQ9NTM9 273 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 PDRG1Q9NUG6 133 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 MIS18AQ9NYP9 233 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CLIC5Q9NZA1 410 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 MGAT4AQ9UM21 535 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 NIP7Q9Y221 180 aaKnown RBP eCLIP2.31□□□□□ -2.04
UBR1-209ENST00000569243 NCKAP1Q9Y2A7 1128 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 CPQQ9Y646 472 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 PFASO15067 1338 aa2.31□□□□□ -2.04
UBR1-209ENST00000569243 ILVBLA1L0T0 632 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 VIMP08670 466 aaKnown RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 DLATP10515 647 aaKnown RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 EEF2P13639 858 aaKnown RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 PSMB4P28070 264 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 SRD5A2P31213 254 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 IER3P46695 156 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 OR3A1P47881 315 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 NPY4RP50391 375 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 PTENP60484 403 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 RBBP4Q09028 425 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 LIPJQ5W064 366 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 ZNF776Q68DI1 518 aaPredicted RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 REP15Q6BDI9 236 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 TMEM182Q6ZP80 229 aaPredicted RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 C17orf107Q6ZR85 190 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 Q71RC1 249 aaPredicted RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 CROCCP3Q8IVE0 287 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 KIAA1524Q8TCG1 905 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 PCNPQ8WW12 178 aaKnown RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 SDHCQ99643 169 aaPredicted RBP2.3□□□□□ -2.04
UBR1-209ENST00000569243 GPR173Q9NS66 373 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 SENP1Q9P0U3 644 aa2.3□□□□□ -2.04
UBR1-209ENST00000569243 LOC390937A0A1W2PQ73 354 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 E7ENQ6 273 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 FAM86B1E9PN63 330 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 CCSO14618 274 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms