RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 C11orf96Q7Z7L8 435 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC35F3Q8IY50 421 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 FBXO22Q8NEZ5 403 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PXT1Q8NFP0 134 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PTCHD1Q96NR3 888 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CD180Q99467 661 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CYP8B1Q9UNU6 501 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PXDNQ92626 1479 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 J3KR12 359 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CA12O43570 354 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 GM2AP17900 193 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CD53P19397 219 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RAG2P55895 527 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 BCL7AQ4VC05 210 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM135Q86UB9 458 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SCGB1C1Q8TD33 95 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 OR8D1Q8WZ84 308 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC39A7Q92504 469 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ISYNA1Q9NPH2 558 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 WIF1Q9Y5W5 379 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RNF215Q9Y6U7 377 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 GPRIN2O60269 458 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 AMHP03971 560 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 HTR1AP08908 422 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 JUPP14923 745 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 VAMP1P23763 118 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ALDH3B1P43353 468 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 FNTBP49356 437 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 NFKB2Q00653 900 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 EMX1Q04741 257 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TECRLQ5HYJ1 363 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 NHSL2Q5HYW2 709 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 BCL2L15Q5TBC7 163 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 FRG2Q64ET8 278 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CFAP77Q6ZQR2 320 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CXorf40AQ8TE69 158 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RAB3CQ96E17 227 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 C16orf58Q96GQ5 468 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 FRG2BQ96QU4 278 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 AGO3Q9H9G7 860 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 NIT2Q9NQR4 276 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 WASHC1A8K0Z3 465 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 A8MV72 311 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ADAMTS3O15072 1205 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RAF1P04049 648 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 OSMP13725 252 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 LUMP51884 338 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CAPSQ13938 189 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ACTBL2Q562R1 376 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 HENMT1Q5T8I9 393 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 C16orf59Q7L2K0 433 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC46A3Q7Z3Q1 461 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 MED17Q9NVC6 651 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 POU2F3Q9UKI9 436 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ARVCFO00192 962 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TREHO43280 583 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TLX3O43711 291 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF35P13682 527 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ARSBP15848 533 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 WASH2PQ6VEQ5 465 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 NDUFAF7Q7L592 441 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC16A9Q7RTY1 509 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PTRH1Q86Y79 214 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PYCR2Q96C36 320 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 C8orf37Q96NL8 207 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 GPER1Q99527 375 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 THAP7Q9BT49 309 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CFAP97Q9P2B7 532 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 MANBAO00462 879 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 TLX2O43763 284 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 AK1P00568 194 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CETPP11597 493 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 DDCP20711 480 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 EDNRAP25101 427 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 MAP2K4P45985 399 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PSMD8P48556 350 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CHIT1Q13231 466 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PPIGQ13427 754 aaKnown RBP eCLIP6.85□□□□□ -1.318e-7■■□□□ 12.5
CNOT1-216ENST00000569240 KCNIP4Q6PIL6 250 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NRROSQ86YC3 692 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC43A3Q8NBI5 491 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OR5T3Q8NGG3 340 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OR52J3Q8NH60 311 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 LHFPL5Q8TAF8 219 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CNIH3Q8TBE1 160 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF354BQ96LW1 612 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC7A5P2Q9GIP4 190 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PLCXD1Q9NUJ7 323 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 IL37Q9NZH6 218 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PCDHB7Q9Y5E2 793 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C20orf202A1L168 122 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 FFAR2O15552 330 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms