RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NINQ8N4C6 2090 aa7.67□□□□□ -1.18
HDGFL3-205ENST00000568129 MYO7BQ6PIF6 2116 aa7.67□□□□□ -1.18
HDGFL3-205ENST00000568129 DIDO1Q9BTC0 2240 aaKnown RBP7.67□□□□□ -1.18
HDGFL3-205ENST00000568129 FREM3P0C091 2139 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 DNAJC13O75165 2243 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ICE1Q9Y2F5 2266 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 A8MT66 165 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PSMD12O00232 456 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 CLDN4O14493 209 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PLPP1O14494 284 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PROM1O43490 865 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 DLX3O60479 287 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 B4GALT2O60909 372 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 CDC123O75794 336 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 SEC24DO94855 1032 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 SEMA3DO95025 777 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 WDPCPO95876 746 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 TGFB1P01137 390 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 SHBGP04278 402 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 IMPDH1P20839 514 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MAOAP21397 527 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 EEF1DP29692 281 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 BSGP35613 385 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 HSD17B3P37058 310 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PLA2G16P53816 162 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 HERVK_113P63132 956 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ZNF33BQ06732 778 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ACTN3Q08043 901 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 RCN2Q14257 317 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MEP1AQ16819 746 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 BTBD16Q32M84 506 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 UNC50Q53HI1 259 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 COLEC12Q5KU26 742 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ACER2Q5QJU3 275 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 WDR93Q6P2C0 686 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 SIRT6Q8N6T7 355 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PTGR2Q8N8N7 351 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MDS2Q8NDY4 140 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 CATSPER1Q8NEC5 780 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 OR52B6Q8NGF0 335 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 RGMAQ96B86 450 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ANKRD9Q96BM1 317 aaPredicted RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PHF21BQ96EK2 531 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 L3HYPDHQ96EM0 354 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 C19orf60Q96EN9 201 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MAPKAP1Q9BPZ7 522 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 CCDC77Q9BR77 488 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ERVK-6Q9BXR3 956 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MFRPQ9BY79 579 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 OR51B5Q9H339 312 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 NOL11Q9H8H0 719 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PRTFDC1Q9NRG1 225 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 RYDENQ9NUL5 291 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 MS4A12Q9NXJ0 267 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 PTGFRNQ9P2B2 879 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 CPSF2Q9P2I0 782 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 TEKT2Q9UIF3 430 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ADAM29Q9UKF5 820 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 NTNG1Q9Y2I2 539 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ASB4Q9Y574 426 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 COL12A1Q99715 3063 aa7.66□□□□□ -1.18
HDGFL3-205ENST00000568129 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 A0A0A6YYD5 115 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 TRAV17A0A0B4J275 112 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 A0A0G2JN53 185 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 A0A1B0GTL3 188 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 A0A1W2PPM1 405 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 DYTNA2CJ06 578 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 OR5H15A6NDH6 313 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 WIPF3A6NGB9 483 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 TMEM200CA6NKL6 621 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 TCP11X1B4DZS4 312 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 PYCARD-AS1I3L0S3 204 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 PPP6CO00743 305 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 SMIM24O75264 130 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 ETHE1O95571 254 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 NUDT17P0C025 328 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 ATP5F1P24539 256 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 CERS1P27544 350 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 GALNSP34059 522 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 TRHRP34981 398 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 CCNG1P51959 295 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 PRKAA2P54646 552 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 MLF1P58340 268 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 NAA20P61599 178 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 RPS13P62277 151 aaKnown RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 CLCQ05315 142 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 SLC18A2Q05940 514 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 SERTAD2Q14140 314 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 ZRSR2Q15696 482 aaKnown RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 CPSF6Q16630 551 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 AP5B1Q2VPB7 878 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 PRR30Q53SZ7 412 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 ZNF678Q5SXM1 525 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 MFSD4BQ5TF39 518 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 FRG2Q64ET8 278 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 LINC00696Q6ZRV3 163 aa7.65□□□□□ -1.18
HDGFL3-205ENST00000568129 ATCAYQ86WG3 371 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms