RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 B3GALT4O96024 378 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ITGB2P05107 769 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 CHRNGP07510 517 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 UMODP07911 640 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 FGF4P08620 206 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 C8orf89P0DMQ9 161 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ACPPP15309 386 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 BGNP21810 368 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 PPP2R1BP30154 601 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 TLX1P31314 330 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 HTR6P50406 440 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 EMP2P54851 167 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 FOXA1P55317 472 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 LIM2P55344 173 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 WDR4P57081 412 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ABCE1P61221 599 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 SNRPNP63162 240 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 RHDQ02161 417 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ACSM2AQ08AH3 577 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 STX3Q13277 289 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ABRAXAS2Q15018 415 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 COL28A1Q2UY09 1125 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ACSM2BQ68CK6 577 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 CLEC6AQ6EIG7 209 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 QSOX2Q6ZRP7 698 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 SHISA6Q6ZSJ9 500 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 MED25Q71SY5 747 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 UBE3DQ7Z6J8 389 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ZNF595Q8IYB9 648 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ADAMTS17Q8TE56 1095 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 TWIST2Q8WVJ9 160 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 METTL2AQ96IZ6 378 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 FER1L6-AS2Q96M78 137 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 CCT7Q99832 543 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 RBCK1Q9BYM8 510 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ACPTQ9BZG2 426 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 PRORYQ9H606 182 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 DDX31Q9H8H2 851 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 WDR41Q9HAD4 459 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ZNF446Q9NWS9 450 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 TRAF6Q9Y4K3 522 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 A0A0A6YYD5 115 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 SLC28A1O00337 649 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 PRMT3O60678 531 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 ALOX12BO75342 701 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 CDC123O75794 336 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-208ENST00000567250 MYO1DO94832 1006 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 NR1D1P20393 614 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 CPN2P22792 545 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 BSGP35613 385 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 GSTM5P46439 218 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 SLC1A6P48664 564 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 MAPK12P53778 367 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 HSD17B7P56937 341 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 TNFRSF17Q02223 184 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 BORAQ6PGQ7 559 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 C19orf48Q6RUI8 117 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 COMMD6Q7Z4G1 85 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 TRIM46Q7Z4K8 759 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 GPR180Q86V85 440 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 DDIASQ8IXT1 998 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 TMEM102Q8N9M5 508 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-208ENST00000567250 FAM47BQ8NA70 645 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 AGR3Q8TD06 166 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 ZNF717Q9BY31 904 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-208ENST00000567250 VN1R1Q9GZP7 353 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-208ENST00000567250 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 FBXW2Q9UKT8 454 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 RAP2CQ9Y3L5 183 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 DNAJC15Q9Y5T4 150 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 HS3ST3B1Q9Y662 390 aa11.47□□□□□ -0.57
SF3B3-208ENST00000567250 KMT2BQ9UMN6 2715 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-208ENST00000567250 DYNC1I1O14576 645 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 KLF11O14901 512 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 B4GALT2O60909 372 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 JRKO75564 520 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 FAM58BPP0C7Q3 252 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 PRPH2P23942 346 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 SERPINB3P29508 390 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 AP2B1P63010 937 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 HMGCS1Q01581 520 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 RHAGQ02094 409 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 BST1Q10588 318 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 RUNX2Q13950 521 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 NR6A1Q15406 480 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 SPDYAQ5MJ70 313 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 CCNYL2Q5T2Q4 361 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 FAM69BQ5VUD6 431 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 PPP1R32Q7Z5V6 425 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 C1orf52Q8N6N3 182 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 CLEC1AQ8NC01 280 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 LRRC8CQ8TDW0 803 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms