RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NFS1Q9Y697 457 aa9□□□□□ -0.97
CAPN3-216ENST00000567071 LOC105369274A0A096LPK9 316 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 A0A0A6YYC8 382 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 LOC102723532A0A0G2JNH3 316 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 TCRBV9S1A1TA0A576 114 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 MROH6A6NGR9 719 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 GOLGA8KD6RF30 607 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 GOLGA8TH3BQL2 631 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 I3L1I5 382 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 GAPDHSO14556 408 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PIAS1O75925 651 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 CRTAMO95727 393 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 SHBGP04278 402 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 RPN2P04844 631 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 F7P08709 466 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 CREB1P16220 341 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 CD9P21926 228 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PHBP35232 272 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OPRM1P35372 400 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 IDUAP35475 653 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 NR0B1P51843 470 aaKnown RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 SLC29A2Q14542 456 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PDCD2Q16342 344 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 NDUFA9Q16795 377 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PRTGQ2VWP7 1150 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 SYTL3Q4VX76 610 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 C3orf62Q6ZUJ4 267 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 RNF44Q7L0R7 432 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 ABHD13Q7L211 337 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 LACC1Q8IV20 430 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OR4N4Q8N0Y3 316 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 C2orf73Q8N5S3 287 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 CSNK1A1LQ8N752 337 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 TNIP2Q8NFZ5 429 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OR2M7Q8NG81 312 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OR4K2Q8NGD2 314 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OR13J1Q8NGT2 312 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 OR2W6PQ8NHA6 318 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 MCOLN3Q8TDD5 553 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 FBF1Q8TES7 1133 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 MRRFQ96E11 262 aaKnown RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PIK3IP1Q96FE7 263 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 LCORQ96JN0 433 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 DEFB126Q9BYW3 111 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 TTTY12Q9BZ98 90 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PPANQ9NQ55 473 aaKnown RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 TREX1Q9NSU2 369 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF701Q9NV72 531 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF446Q9NWS9 450 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 ZNF226Q9NYT6 803 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 C6orf203Q9P0P8 240 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-216ENST00000567071 SLC17A6Q9P2U8 582 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 FKBPLQ9UIM3 349 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 SLC39A10Q9ULF5 831 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 PCDHGB3Q9Y5G1 929 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 LIPGQ9Y5X9 500 aa8.99□□□□□ -0.97
CAPN3-216ENST00000567071 A0A087WUV0 522 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ZCWPW2A0A1B0GU75 182 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 MAGEB16A2A368 324 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 CCDC162PA2VCL2 907 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 OR51F1A6NGY5 319 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 SMIM23A6NLE4 172 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 C2orf81A6NN90 581 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 TXNDC9O14530 226 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 HCN1O60741 890 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ERN1O75460 977 aaKnown RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 SRP72O76094 671 aaKnown RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 VAPBO95292 243 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ABHD2P08910 425 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ITGALP20701 1170 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 CEACAM8P31997 349 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 STX2P32856 288 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 TIMP3P35625 211 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 MAGEA5P43359 124 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 OR4D2P58180 307 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 PRAMEP78395 509 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 MAT1AQ00266 395 aaKnown RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 PLOD1Q02809 727 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 SLC10A1Q14973 349 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ABRAXAS2Q15018 415 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 SF3B4Q15427 424 aaKnown RBP eCLIP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 NSDHLQ15738 373 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 HDXQ7Z353 690 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 RAB42Q8N4Z0 105 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 OTUD6BQ8N6M0 293 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 LINC01555Q8NAE3 123 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 NAXEQ8NCW5 288 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 PSD4Q8NDX1 1056 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 ELP5Q8TE02 316 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 STYXQ8WUJ0 223 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 RERGQ96A58 199 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 TRMT61AQ96FX7 289 aaKnown RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 CERS2Q96G23 380 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 RAB11FIP5Q9BXF6 653 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 C12orf65Q9H3J6 166 aaKnown RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 SMYD2Q9NRG4 433 aa8.98□□□□□ -0.97
CAPN3-216ENST00000567071 C20orf96Q9NUD7 363 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 NLE1Q9NVX2 485 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-216ENST00000567071 PSD3Q9NYI0 1048 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms