RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 AIF1LQ9BQI0 150 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 PELI2Q9HAT8 420 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 LZTFL1Q9NQ48 299 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 TRMT1Q9NXH9 659 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 PPIEQ9UNP9 301 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 NCKAP5O14513 1909 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 ARHGAP21Q5T5U3 1957 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 ATP6AP2A0A1C7CYW4 349 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 URADA6NGE7 173 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 FIGNL2A6NMB9 653 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 BCKDKO14874 412 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 ATP6AP2O75787 350 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 AHSGP02765 367 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 AP1S2P56377 157 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 IL2P60568 153 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 SLC13A2Q13183 592 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 C18orf21Q32NC0 220 aaPredicted RBP14.35□□□□□ -0.11
PALB2-205ENST00000567003 TRPV3Q8NET8 790 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 CCT6BQ92526 530 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 NINJ1Q92982 152 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 SCYL1Q96KG9 808 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 CLEC4MQ9H2X3 399 aaPredicted RBP14.35□□□□□ -0.11
PALB2-205ENST00000567003 CLK4Q9HAZ1 481 aaKnown RBP14.35□□□□□ -0.11
PALB2-205ENST00000567003 SEMA4BQ9NPR2 832 aaPredicted RBP14.35□□□□□ -0.11
PALB2-205ENST00000567003 DLL4Q9NR61 685 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 ALKBH4Q9NXW9 302 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 SLC22A14Q9Y267 594 aa14.35□□□□□ -0.11
PALB2-205ENST00000567003 NSD1Q96L73 2696 aaPredicted RBP14.34□□□□□ -0.11
PALB2-205ENST00000567003 ERI3O43414 337 aaKnown RBP14.34□□□□□ -0.11
PALB2-205ENST00000567003 PROM1O43490 865 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 IGHG3P01860 377 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 SERPINA6P08185 405 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 CCL3P10147 92 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 DRD2P14416 443 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 HK2P52789 917 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 RAB38P57729 211 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 BMPR2Q13873 1038 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 C1orf185Q5T7R7 199 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 SBSNQ6UWP8 590 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 GPALPP1Q8IXQ4 340 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 FAM109AQ8N4B1 249 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 GPATCH11Q8N954 259 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 GAL3ST3Q96A11 431 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 MAGOHBQ96A72 148 aaKnown RBP14.34□□□□□ -0.11
PALB2-205ENST00000567003 RMND5BQ96G75 393 aaPredicted RBP14.34□□□□□ -0.11
PALB2-205ENST00000567003 TRIM54Q9BYV2 358 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 ADAP2Q9NPF8 381 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
PALB2-205ENST00000567003 CRIM1Q9NZV1 1036 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 SPRR3Q9UBC9 169 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 ACAD8Q9UKU7 415 aa14.34□□□□□ -0.11
PALB2-205ENST00000567003 A0A1B0GVC2 190 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 OR14I1A6ND48 311 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 NPEPPSL1A6NEC2 478 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 CDC7O00311 574 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 IFNA16P05015 189 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 CCDC175P0C221 793 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 PGAM1P18669 254 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 ENDOUP21128 410 aaKnown RBP14.33□□□□□ -0.12
PALB2-205ENST00000567003 CNR1P21554 472 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 CERS1P27544 350 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 UQCRC1P31930 480 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 KIR2DL3P43628 341 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 HSD17B7P56937 341 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 FOXO1Q12778 655 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 PPP1R3AQ16821 1122 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 ADNP2Q6IQ32 1131 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 HSDL2Q6YN16 418 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 RGS9BPQ6ZS82 235 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 GK5Q6ZS86 529 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 FAM47EQ6ZV65 393 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 Q71RC1 249 aaPredicted RBP14.33□□□□□ -0.12
PALB2-205ENST00000567003 ATL1Q8WXF7 558 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 MS4A14Q96JA4 679 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 FAR2Q96K12 515 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 QRFPRQ96P65 431 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 FAM173AQ9BQD7 235 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 OR8D2Q9GZM6 311 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 LDAHQ9H6V9 325 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 IL1RL2Q9HB29 575 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 SLC24A3Q9HC58 644 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 RASSF1Q9NS23 344 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 RPH3AQ9Y2J0 694 aaPredicted RBP14.33□□□□□ -0.12
PALB2-205ENST00000567003 MPDZO75970 2070 aa14.33□□□□□ -0.12
PALB2-205ENST00000567003 AQP7O14520 342 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 TBX6O95947 436 aaPredicted RBP14.32□□□□□ -0.12
PALB2-205ENST00000567003 DNASE1P24855 282 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 MAN2A2P49641 1150 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 PLA2G16P53816 162 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 WNT3P56703 355 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 ADAM8P78325 824 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 ID2Q02363 134 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 SLBPQ14493 270 aaKnown RBP eCLIP14.32□□□□□ -0.12
PALB2-205ENST00000567003 ELAVL1Q15717 326 aaKnown RBP14.32□□□□□ -0.12
PALB2-205ENST00000567003 SLC25A35Q3KQZ1 300 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 MSS51Q4VC12 460 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 NDUFAF5Q5TEU4 345 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms