RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 PIGRP01833 764 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PXNP49023 591 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 NR0B1P51843 470 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 FGL2Q14314 439 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TSEN54Q7Z6J9 526 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 OR9Q1Q8NGQ5 310 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 RXFP2Q8WXD0 754 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CLEC4DQ8WXI8 215 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TSPAN17Q96FV3 270 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CELF6Q96J87 481 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 PGLYRP2Q96PD5 576 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 VAT1Q99536 393 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CHIAQ9BZP6 476 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SDR39U1Q9NRG7 319 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 FAM95CA0A1B0GW59 222 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 FZD9O00144 591 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SLC7A4O43246 635 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NUDT21O43809 227 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 PLOD3O60568 738 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ERCC1P07992 297 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 ADRA2AP08913 450 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ITPKAP23677 461 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GPC1P35052 558 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 STAT5BP51692 787 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HMGA2P52926 109 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZNF91Q05481 1191 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 BTN1A1Q13410 526 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KCTD11Q693B1 232 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ENPP6Q6UWR7 440 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CLEC9AQ6UXN8 241 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PGBD5Q8N414 524 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HTR3CQ8WXA8 447 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SHDQ96IW2 340 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 LCORQ96JN0 433 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 TSGA13Q96PP4 275 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 FSD1LQ9BXM9 530 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CPEB1Q9BZB8 566 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 XYLT2Q9H1B5 865 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 DYRK4Q9NR20 520 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NDUFAF4Q9P032 175 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MRPS17Q9Y2R5 130 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 NEUROG3Q9Y4Z2 214 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NCF1BA6NI72 391 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 NCF1CA8MVU1 366 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 H7C4K7 107 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HSPA12AO43301 675 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SMPD2O60906 423 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PROS1P07225 676 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SLC10A3P09131 477 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CSF3P09919 207 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 STAG3L2P0CL84 134 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NCF1P14598 390 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 HNF1AP20823 631 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 IL5RAQ01344 420 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 DEFA6Q01524 100 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MEF2AQ02078 507 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 GRM7Q14831 915 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZNF628Q5EBL2 1059 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 C5orf46Q6UWT4 87 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PAMR1Q6UXH9 720 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GCNT7Q6ZNI0 430 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SSX6Q7RTT6 188 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PROSER1Q86XN7 944 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SCUBE3Q8IX30 993 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 LIX1Q8N485 282 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 OR5T3Q8NGG3 340 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 C9orf43Q8TAL5 461 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 ST7LQ8TDW4 575 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CENPIQ92674 756 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 RBP7Q96R05 134 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KCTD15Q96SI1 283 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 TPPP3Q9BW30 176 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 POLR3FQ9H1D9 316 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 NSUN3Q9H649 340 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 NT5DC2Q9H857 520 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HRH3Q9Y5N1 445 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ERI2A8K979 691 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 DDX39AO00148 427 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 LYRM1O43325 122 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 AOC2O75106 756 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CFDP00746 253 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 CYP11A1P05108 521 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CLCN3P51790 818 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 RPL6Q02878 288 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 GRK1Q15835 563 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CDO1Q16878 200 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.81□□□□□ -1.963e-6■■■□□ 17.7
CHD9-218ENST00000566029 RFTN2Q52LD8 501 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 METTL11BQ5VVY1 283 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ELP2Q6IA86 826 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 FTMTQ8N4E7 242 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 DNAJC22Q8N4W6 341 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ATG16L2Q8NAA4 619 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PIWIL1Q96J94 861 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 THUMPD3Q9BV44 507 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 CHRNA10Q9GZZ6 450 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GPATCH2Q9NW75 528 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NDRG3Q9UGV2 375 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PCDHGB7Q9Y5F8 929 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 OTOFQ9HC10 1997 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms