RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ANKRD37Q7Z713 158 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 EXOC3L1Q86VI1 746 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 C10orf107Q8IVU9 208 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 MYRIPQ8NFW9 859 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 TM9SF4Q92544 642 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 PGM2Q96G03 612 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 IMMP1LQ96LU5 166 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 MAGEB10Q96LZ2 347 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 TBCDQ9BTW9 1192 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 RBCK1Q9BYM8 510 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 ROGDIQ9GZN7 287 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 CENPHQ9H3R5 247 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 PSD3Q9NYI0 1048 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 STK38LQ9Y2H1 464 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 J3QKU1 62 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 SAP18O00422 153 aaKnown RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 RTCAO00442 366 aaKnown RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 PRMT3O60678 531 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 ETHE1O95571 254 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 PRR35P0CG20 571 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 ATP5A1P25705 553 aaKnown RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 PTX3P26022 381 aaPredicted RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 CERS1P27544 350 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 MTTPP55157 894 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 PKNOX1P55347 436 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 LCP2Q13094 533 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 IFT88Q13099 833 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 CUL3Q13618 768 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 ABRAXAS2Q15018 415 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 NADK2Q4G0N4 442 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 LIPMQ5VYY2 423 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 QSOX2Q6ZRP7 698 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 FRMD7Q6ZUT3 714 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 ZADH2Q8N4Q0 377 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 PTCHD1Q96NR3 888 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 KCNC2Q96PR1 638 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 LMF1Q96S06 567 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 EPN3Q9H201 632 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 COPS7BQ9H9Q2 264 aaPredicted RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 PPT2Q9UMR5 302 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
HERPUD1-210ENST00000565966 CROCCQ5TZA2 2017 aa13□□□□□ -0.33
HERPUD1-210ENST00000565966 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 PLPP1O14494 284 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 UBFD1O14562 309 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SCELO95171 688 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ETV4P43268 484 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SSR2P43308 183 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 RAP1GDS1P52306 607 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 RAB38P57729 211 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 NAA20P61599 178 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 BTG2P78543 158 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 TLE1Q04724 770 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 RCN2Q14257 317 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 CASP8Q14790 479 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 AP5B1Q2VPB7 878 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SGO1Q5FBB7 561 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 CFAP157Q5JU67 520 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 C10orf62Q5T681 223 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 OR4C11Q6IEV9 310 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 JMJD6Q6NYC1 403 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 CDYL2Q8N8U2 506 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ACOT4Q8N9L9 421 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 AGAP11Q8TF27 550 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 TSLPQ969D9 159 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 RGMAQ96B86 450 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 LPAR4Q99677 370 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 WDR77Q9BQA1 342 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 MECRQ9BV79 373 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 GATA5Q9BWX5 397 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SORBS1Q9BX66 1292 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SLC29A3Q9BZD2 475 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ELOVL6Q9H5J4 265 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ZBTB20Q9HC78 741 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SSU72Q9NP77 194 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 FARSBQ9NSD9 589 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 KCMF1Q9P0J7 381 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SNX6Q9UNH7 406 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 MMACHCQ9Y4U1 282 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
HERPUD1-210ENST00000565966 SHANK1Q9Y566 2161 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms