RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 CHIT1Q13231 466 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 EFTUD2Q15029 972 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■■■□ 21.2
MAP1LC3B-207ENST00000565788 RNFT1Q5M7Z0 435 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MTFR2Q6P444 385 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 Q6ZPB1 254 aaPredicted RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 RAPH1Q70E73 1250 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LRRC70Q7Z2Q7 622 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ISCA2Q86U28 154 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SPPL2CQ8IUH8 684 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF595Q8IYB9 648 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TMEM125Q96AQ2 219 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 VMP1Q96GC9 406 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CD244Q9BZW8 370 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PRDM7Q9NQW5 492 aa16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PPIEQ9UNP9 301 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MRPS33Q9Y291 106 aaKnown RBP16.25■□□□□ 0.19
MAP1LC3B-207ENST00000565788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■□□□ 14.1
MAP1LC3B-207ENST00000565788 MYOCOSA0A1B0GUC4 107 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SUPT3HB4E1H0 165 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 UBXN8O00124 270 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CYR61O00622 381 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SUPT3HO75486 399 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ITGA10O75578 1167 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PRF1P14222 555 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF24P17028 368 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 STX2P32856 288 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MSH2P43246 934 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MEOX1P50221 254 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CAV1Q03135 178 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LAPTM5Q13571 262 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 E2F2Q14209 437 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TBCCQ15814 346 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HIST2H2ACQ16777 129 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PAGE2BQ5JRK9 111 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 HIST2H2AA3Q6FI13 130 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 RPTNQ6XPR3 784 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF793Q6ZN11 406 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 BNC2Q6ZN30 1099 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 UBE3DQ7Z6J8 389 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 GHDCQ8N2G8 530 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 STAG3L4Q8TBR4 150 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ATOH8Q96SQ7 321 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ADAP2Q9NPF8 381 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 IGSF5Q9NSI5 407 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NUDT4Q9NZJ9 180 aa16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KLF13Q9Y2Y9 288 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KLF2Q9Y5W3 355 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KERAO60938 352 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LTA4HP09960 611 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ESRRAP11474 423 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CASP2P42575 452 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ETF1P62495 437 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TGM3Q08188 693 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 C16orf47Q6ZP98 133 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TBC1D1Q86TI0 1168 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SULF2Q8IWU5 870 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CHERPQ8IWX8 916 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CYP4Z2PQ8N1L4 340 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TMEM156Q8N614 296 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZNF473Q8WTR7 871 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NXNL1Q96CM4 212 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MS4A8Q9BY19 250 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LIN28AQ9H9Z2 209 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NMRAL1Q9HBL8 299 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KCMF1Q9P0J7 381 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CREBBPQ92793 2442 aa16.23■□□□□ 0.19
MAP1LC3B-207ENST00000565788 RTCAO00442 366 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CTNSO60931 367 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SH3BGRLO75368 114 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 IFNA16P05015 189 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PCNAP12004 261 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ABOP16442 354 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CRABP2P29373 138 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PTGER1P34995 402 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 RFC3P40938 356 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NAB1Q13506 487 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ELAVL1Q15717 326 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 NCCRP1Q6ZVX7 275 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MDGA2Q7Z553 956 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 FGD2Q7Z6J4 655 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 UBTD2Q8WUN7 234 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KCTD4Q8WVF5 259 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 SREK1Q8WXA9 508 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 KCNC2Q96PR1 638 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MAPKAP1Q9BPZ7 522 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 CCDC77Q9BR77 488 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LYRM4Q9HD34 91 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 OPTCQ9UBM4 332 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MEMO1Q9Y316 297 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 MYO9AB2RTY4 2548 aa16.22■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ESYT3A0FGR9 886 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TMEM200CA6NKL6 621 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 K7EPI3 171 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 PEX1O43933 1283 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 LDB3O75112 727 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ZFAND5O76080 213 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 TGFB1P01137 390 aa16.21■□□□□ 0.19
MAP1LC3B-207ENST00000565788 ATP5A1P25705 553 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms