RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	EIF4H	Q15056	248 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	FBXO43	Q4G163	708 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF805	Q5CZA5	627 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	COLEC12	Q5KU26	742 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	LY6G5C	Q5SRR4	150 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ARMC8	Q8IUR7	673 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	DEPDC4	Q8N2C3	294 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	OXR1	Q8N573	874 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	PPCDC	Q96CD2	204 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	PIP5K1A	Q99755	562 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	WRAP53	Q9BUR4	548 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	EFCAB11	Q9BUY7	163 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	SP140L	Q9H930	580 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	MYNN	Q9NPC7	610 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	UGT2A1	Q9Y4X1	527 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	WNT6	Q9Y6F9	365 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	HELZ	P42694	1942 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ISPD	A4D126	451 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF197	O14709	1029 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	LILRB5	O75023	590 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	SRPRA	P08240	638 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	DBT	P11182	482 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	POU2F1	P14859	743 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ITGA2	P17301	1181 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	CBL	P22681	906 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	PBX2	P40425	430 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	TAS2R50	P59544	299 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	MEF2A	Q02078	507 aa	Predicted RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	C2orf80	Q0P641	193 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	PTGES3	Q15185	160 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ARMCX4	Q5H9R4	360 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	STEAP3	Q658P3	488 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	TRIM40	Q6P9F5	258 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	GEMIN6	Q8WXD5	167 aa	Known RBP	12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	CENPO	Q9BU64	300 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	MCOLN1	Q9GZU1	580 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	PRM3	Q9NNZ6	103 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ABCB10	Q9NRK6	738 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	MS4A12	Q9NXJ0	267 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ANKMY1	Q9P2S6	941 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	IL36A	Q9UHA7	158 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	ITM2B	Q9Y287	266 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	HCN4	Q9Y3Q4	1203 aa		12.58	□□□□□ -0.4
SCAPER-215	ENST00000565507	SOD1	P00441	154 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ARAF	P10398	606 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	TAP2	Q03519	686 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	DOC2B	Q14184	412 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF630	Q2M218	657 aa	Predicted RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	C19orf48	Q6RUI8	117 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	METTL4	Q8N3J2	472 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	STX19	Q8N4C7	294 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	AMER2	Q8N7J2	671 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	B3GNT7	Q8NFL0	401 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	SP7	Q8TDD2	431 aa	Predicted RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	HPS1	Q92902	700 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	FAM129B	Q96TA1	746 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	EPHX3	Q9H6B9	360 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	CPNE5	Q9HCH3	593 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	TAS2R16	Q9NYV7	291 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	DKK3	Q9UBP4	350 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	IFT52	Q9Y366	437 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ELFN1	P0C7U0	828 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	POLR2E	P19388	210 aa	Known RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF181	Q2M3W8	571 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	CCDC149	Q6ZUS6	474 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	NLGN4X	Q8N0W4	816 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	MMP21	Q8N119	569 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF366	Q8N895	744 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF740	Q8NDX6	193 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	VN1R2	Q8NFZ6	395 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	APOBEC4	Q8WW27	367 aa	Known RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	GTPBP3	Q969Y2	492 aa	Known RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	CDCA4	Q9BXL8	241 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	CCDC59	Q9P031	241 aa	Known RBP	12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	FTSJ1	Q9UET6	329 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	KLK4	Q9Y5K2	254 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	ENPP4	Q9Y6X5	453 aa		12.57	□□□□□ -0.4
SCAPER-215	ENST00000565507	TNRC18	O15417	2968 aa	Predicted RBP	12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	LOC100506127	A0A0U1RQW1	187 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	SAGE2P	A6NJ88	616 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	TBX1	O43435	398 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	GAST	P01350	101 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	KLK1	P06870	262 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	CEBPB	P17676	345 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	GANAB	Q14697	944 aa	Known RBP	12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	DUSP7	Q16829	419 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	TPRG1L	Q5T0D9	272 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	KLHL17	Q6TDP4	642 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	VN1R5	Q7Z5H4	357 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	CFAP206	Q8IYR0	622 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	CRELD1	Q96HD1	420 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	OR5M11	Q96RB7	305 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	SLC6A16	Q9GZN6	736 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	DUSP12	Q9UNI6	340 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507		A0A1W2PRB8	838 aa		12.56	□□□□□ -0.4
SCAPER-215	ENST00000565507	TRBC2	A0A5B9	178 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms