RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C11orf42Q8N5U0 333 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 CCDC89Q8N998 374 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 OR13C5Q8NGS8 318 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 RADILQ96JH8 1075 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 MINDY3Q9H8M7 445 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 MGAT4AQ9UM21 535 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 ARHGEF37A1IGU5 675 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 FGF19O95750 216 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 KRT3P12035 628 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 ANPEPP15144 967 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 SPRP35270 261 aaPredicted RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 CETN1Q12798 172 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 CEACAM7Q14002 265 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 CCL14Q16627 93 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 RFTN2Q52LD8 501 aaPredicted RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 PRR30Q53SZ7 412 aaPredicted RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 FHL5Q5TD97 284 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 PLPP4Q5VZY2 271 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 SPATA19Q7Z5L4 167 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 SERINC5Q86VE9 423 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 TBC1D10CQ8IV04 446 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 SLC34A3Q8N130 599 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 NME8Q8N427 588 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 ZNRF1Q8ND25 227 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 OR6T1Q8NGN1 323 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 PCNPQ8WW12 178 aaKnown RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 ANKRD27Q96NW4 1050 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 RAB3IPQ96QF0 476 aaPredicted RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 SP140LQ9H930 580 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 DHRS4-AS1Q9P1J3 65 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 CFDP1Q9UEE9 299 aaPredicted RBP3.55□□□□□ -1.84
UBR1-205ENST00000564540 CPQQ9Y646 472 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 KIF25-AS1Q9Y6Z4 181 aa3.55□□□□□ -1.84
UBR1-205ENST00000564540 POGZQ7Z3K3 1410 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 UMODL1Q5DID0 1318 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 C2orf92A0A1B0GVN3 265 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 ANKDD1BA6NHY2 528 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 SRRM4A7MD48 611 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 HMGB1P1B2RPK0 211 aaPredicted RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 DKC1O60832 514 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR1-205ENST00000564540 ZNF253O75346 499 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 APOA4P06727 396 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 ZFYP08048 801 aaPredicted RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 POU5F1Q01860 360 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 GPR50Q13585 617 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 NUFIP2Q7Z417 695 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 DZIP1Q86YF9 867 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 OR6F1Q8NGZ6 308 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 GPR148Q8TDV2 347 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 SGF29Q96ES7 293 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 SERINC2Q96SA4 455 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 BAG1Q99933 345 aaPredicted RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 UBE2TQ9NPD8 197 aaPredicted RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 SH3GLB2Q9NR46 395 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 ARMCX1Q9P291 453 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 TMED7Q9Y3B3 224 aa3.54□□□□□ -1.84
UBR1-205ENST00000564540 MRPL11Q9Y3B7 192 aaKnown RBP3.54□□□□□ -1.84
UBR1-205ENST00000564540 CCDC162PA2VCL2 907 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 SCO2O43819 266 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 FRAT2O75474 233 aaPredicted RBP3.53□□□□□ -1.84
UBR1-205ENST00000564540 IGHG3P01860 377 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 ADARP55265 1226 aaKnown RBP3.53□□□□□ -1.84
UBR1-205ENST00000564540 FASTKQ14296 549 aaKnown RBP3.53□□□□□ -1.84
UBR1-205ENST00000564540 PCK2Q16822 640 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 SLC22A6Q4U2R8 563 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 RFWD3Q6PCD5 774 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 ELMOD1Q8N336 334 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 TMEM99Q8N816 258 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 SETD6Q8TBK2 473 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 SEPT8Q92599 483 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 RANBP9Q96S59 729 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 HSD17B14Q9BPX1 270 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 NMUR1Q9HB89 426 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 CUTCQ9NTM9 273 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 FBXO7Q9Y3I1 522 aa3.53□□□□□ -1.84
UBR1-205ENST00000564540 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 OR5H15A6NDH6 313 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 ZNF724A8MTY0 619 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 ACKR3P25106 362 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 CHRNA3P32297 505 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 SLC1A6P48664 564 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 FKBP1BP68106 108 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 LINC00242Q5T6M2 205 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
UBR1-205ENST00000564540 PM20D1Q6GTS8 502 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 CAVIN1Q6NZI2 390 aaKnown RBP3.52□□□□□ -1.85
UBR1-205ENST00000564540 ARMCX5Q6P1M9 558 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 NLRP14Q86W24 1093 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 HSCBQ8IWL3 235 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 CARNMT1Q8N4J0 409 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 Q8N7P7 452 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 KIAA0895Q8NCT3 520 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 ZNF274Q96GC6 653 aaPredicted RBP3.52□□□□□ -1.85
UBR1-205ENST00000564540 CCM2Q9BSQ5 444 aa3.52□□□□□ -1.85
UBR1-205ENST00000564540 AP1M1Q9BXS5 423 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms