RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 NOVA1P51513 510 aaKnown RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 RAB38P57729 211 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 SIM1P81133 766 aaPredicted RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 C2orf80Q0P641 193 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 PDE7AQ13946 482 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 ISXQ2M1V0 245 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLK3-214ENST00000564096 NDUFAF5Q5TEU4 345 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 HES3Q5TGS1 186 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 ANXA8L1Q5VT79 327 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 OR52E8Q6IFG1 317 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 MRM1Q6IN84 353 aaKnown RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 DHRS13Q6UX07 377 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 TTLL10Q6ZVT0 673 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 CAMKMTQ7Z624 323 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 ARHGEF39Q8N4T4 335 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 KRTCAP2Q8N6L1 136 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 POU5F2Q8N7G0 328 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 OR9A4Q8NGU2 314 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 GFM2Q969S9 779 aaKnown RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 BHLHE41Q9C0J9 482 aaPredicted RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 ACTR5Q9H9F9 607 aaPredicted RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 ARL8BQ9NVJ2 186 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 FAM120CQ9NX05 1096 aaKnown RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 TOR4AQ9NXH8 423 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 ATP6V1HQ9UI12 483 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 FBXW2Q9UKT8 454 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 DAPP1Q9UN19 280 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 ENTPD4Q9Y227 616 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 NDUFAF1Q9Y375 327 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 MRPS2Q9Y399 296 aaKnown RBP12.14□□□□□ -0.47
CLK3-214ENST00000564096 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
CLK3-214ENST00000564096 SNRNP200O75643 2136 aaKnown RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 CCDC187A0A096LP49 1063 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 A0A1W2PP18 115 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 H3BMH7 237 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 SGK494L7N484 410 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 MRASO14807 208 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 SLC30A4O14863 429 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ZNF749O43361 778 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 TBX19O60806 448 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 KRT34O76011 436 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 AIFM1O95831 613 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 CTSBP07858 339 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 FURINP09958 794 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 JMJD7P0C870 316 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 RNH1P13489 461 aaKnown RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 CAPN3P20807 821 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 SDHBP21912 280 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 FBLP22087 321 aaKnown RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 NTSP30990 170 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 NUDT2P50583 147 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 LIM2P55344 173 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 HNRNPH2P55795 449 aaKnown RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 SHC2P98077 582 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ACTN3Q08043 901 aaPredicted RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 BNIP1Q12981 228 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 DSG2Q14126 1118 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 PGS1Q32NB8 556 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 SPANXN4Q5MJ08 99 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ARHGAP40Q5TG30 622 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 RHBDD2Q6NTF9 364 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 CEACAM20Q6UY09 585 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 DGLUCYQ7Z3D6 616 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 PDSS2Q86YH6 399 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 TICAM1Q8IUC6 712 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 RIMKLAQ8IXN7 391 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 OR8J2Q8NGG1 315 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 DNAJB8Q8NHS0 232 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLK3-214ENST00000564096 TM4SF18Q96CE8 201 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 MMABQ96EY8 250 aaPredicted RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 EGLN2Q96KS0 407 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 TEX37Q96LM6 180 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 OR52E6Q96RD3 313 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ZPBPQ9BS86 351 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 RTKNQ9BST9 563 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 TEX10Q9NXF1 929 aaPredicted RBP12.13□□□□□ -0.47
CLK3-214ENST00000564096 SH3BP4Q9P0V3 963 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 PSME2Q9UL46 239 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ASB4Q9Y574 426 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 PCDHA9Q9Y5H5 950 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
CLK3-214ENST00000564096 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 C9JVG2 144 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 PDPK1O15530 556 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 B3GALT4O96024 378 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 PIM1P11309 404 aaPredicted RBP12.12□□□□□ -0.47
CLK3-214ENST00000564096 ALAS2P22557 587 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 IL12AP29459 219 aa12.12□□□□□ -0.47
CLK3-214ENST00000564096 GCGRP47871 477 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms