RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RNH1P13489 461 aaKnown RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 ENO3P13929 434 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 STIP1P31948 543 aaKnown RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 SOX18P35713 384 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 PIGAP37287 484 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 SLC1A2P43004 574 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 NKX6-1P78426 367 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 PLGLB1Q02325 96 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 ACSF3Q4G176 576 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 Q5PR19 223 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 ZNF470Q6ECI4 717 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 MRNIPQ6NTE8 343 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 UGT3A1Q6NUS8 523 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 STRA8Q7Z7C7 330 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 CAND1Q86VP6 1230 aaKnown RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 SLC22A16Q86VW1 577 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 GPALPP1Q8IXQ4 340 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 OTUD6BQ8N6M0 293 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 OR56A3Q8NH54 315 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 GOT1L1Q8NHS2 421 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 LINC01560Q8TB33 94 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 CAPZA3Q96KX2 299 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 QRFPRQ96P65 431 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 FAM173AQ9BQD7 235 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 TSGA10Q9BZW7 698 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 INTS10Q9NVR2 710 aaKnown RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-204ENST00000563739 HPF1Q9NWY4 346 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 MYOTQ9UBF9 498 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 B4GALT7Q9UBV7 327 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 ZFP69BQ9UJL9 534 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 MMACHCQ9Y4U1 282 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 HEATR5AQ86XA9 2040 aa9.56□□□□□ -0.88
SF3B3-204ENST00000563739 A0A0G2JN53 185 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 ATP6AP2A0A1C7CYW4 349 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 GOLGA6L9A6NEM1 432 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 TRIM64A6NGJ6 449 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 TRIM64BA6NI03 449 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 CLCA1A8K7I4 914 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 ACOT7O00154 380 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 OR1F1O43749 312 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 ZNF500O60304 480 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 ATP6AP2O75787 350 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 GAS8O95995 478 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 CCDC175P0C221 793 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 EPXP11678 715 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 CNR1P21554 472 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 BMP5P22003 454 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 GABRB3P28472 473 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 HNRNPH1P31943 449 aaKnown RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 HNF4AP41235 474 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 NPY2RP49146 381 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 MAN2A2P49641 1150 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 NAP1L1P55209 391 aaKnown RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 CRYZQ08257 329 aaKnown RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 SNX1Q13596 522 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 KEAP1Q14145 624 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 POU4F3Q15319 338 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 PCBP2Q15366 365 aaKnown RBP eCLIP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 DCST1Q5T197 706 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 NDUFAF5Q5TEU4 345 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 ANKRD22Q5VYY1 191 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 NEPROQ6NW34 567 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 RGS9BPQ6ZS82 235 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 LRRC25Q8N386 305 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 PPP1R14CQ8TAE6 165 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 PTPMT1Q8WUK0 201 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-204ENST00000563739 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 NEIL2Q969S2 332 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 FAM129AQ9BZQ8 928 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 RHBGQ9H310 441 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 KCNF1Q9H3M0 494 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 PAK5Q9P286 719 aa9.55□□□□□ -0.88
SF3B3-204ENST00000563739 TRGV5A0A0B4J1U4 118 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 E5RI56 91 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 E7EVH7 732 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 CYR61O00622 381 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 ZBTB14O43829 449 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 HCN1O60741 890 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 ZFAND5O76080 213 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 TPSB2P20231 275 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 CAPRIN1Q14444 709 aaKnown RBP9.54□□□□□ -0.88
SF3B3-204ENST00000563739 TPSAB1Q15661 275 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 ZNF791Q3KP31 576 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-204ENST00000563739 TTLL9Q3SXZ7 439 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 RBM20Q5T481 1227 aaKnown RBP9.54□□□□□ -0.88
SF3B3-204ENST00000563739 MEI1Q5TIA1 1274 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 SHEQ5VZ18 495 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 PAOXQ6QHF9 649 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 RTL4Q6ZR62 310 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 GK5Q6ZS86 529 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 VN1R5Q7Z5H4 357 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 SLC13A5Q86YT5 568 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-204ENST00000563739 PHC2Q8IXK0 858 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 GOLM1Q8NBJ4 401 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 IGFBPL1Q8WX77 278 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 ASB15Q8WXK1 588 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 NTNG2Q96CW9 530 aa9.54□□□□□ -0.88
SF3B3-204ENST00000563739 PCBD2Q9H0N5 130 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms