RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RALGAPA1Q6GYQ0 2036 aa4.45□□□□□ -1.7
CDR2-203ENST00000563573 ADAMTS9Q9P2N4 1935 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TMEM131Q92545 1883 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KIR2DS5A0A0G2JLQ3 304 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 A0A0G2JNG1 304 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KIR2DS3K7RE56 304 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 NDUFAB1O14561 156 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 YKT6O15498 198 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TAPBPO15533 448 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ZW10O43264 779 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 AQP9O43315 295 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KLK8O60259 260 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA12O60330 932 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 EDF1O60869 148 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 SHOX2O60902 331 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 ERN1O75460 977 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 WDR47O94967 919 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TGDSO95455 350 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CHEK2O96017 543 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 OTCP00480 354 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 WNT1P04628 370 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ANXA6P08133 673 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ALPPL2P10696 532 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KITP10721 976 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 F3P13726 295 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 XRCC1P18887 633 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 AGXTP21549 392 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 AK4P27144 223 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 EEF1DP29692 281 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 HOXD12P35452 270 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ARL1P40616 181 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 HSPA7P48741 367 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PPM1FP49593 454 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 RPL14P50914 215 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 CCNG1P51959 295 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ARFIP2P53365 341 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ATXN3P54252 364 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 PNLIPRP1P54315 467 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PKNOX1P55347 436 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 NXPH1P58417 271 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 GABPB1Q06547 395 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 MGAT2Q10469 447 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 BST1Q10588 318 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 EIF2B5Q13144 721 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 PRKG2Q13237 762 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 C1orf61Q13536 156 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TSTA3Q13630 321 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 GTF2H2Q13888 395 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KIR2DS5Q14953 304 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ARHGAP19Q14CB8 494 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CLCA4Q14CN2 919 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 RPE65Q16518 533 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 RBBP7Q16576 425 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 HIST2H2ACQ16777 129 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 PPP1R3AQ16821 1122 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ZNF658BQ4V348 819 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 UNC50Q53HI1 259 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 THEMIS2Q5TEJ8 643 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 GKAP1Q5VSY0 366 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 HIST2H2AA3Q6FI13 130 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CAPN13Q6MZZ7 669 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 GTF2H2CQ6P1K8 395 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ZNF529Q6P280 563 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 IYDQ6PHW0 289 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SLC30A9Q6PML9 568 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 AGTRAPQ6RW13 159 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 FAM83HQ6ZRV2 1179 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 ZCCHC23Q6ZST2 131 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 FAM47EQ6ZV65 393 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 LRRC70Q7Z2Q7 622 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 EFL1Q7Z2Z2 1120 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 SLC9B2Q86UD5 537 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 DCUN1D3Q8IWE4 304 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SYTL1Q8IYJ3 562 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 LRRC34Q8IZ02 419 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CLYBLQ8N0X4 340 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SLC22A18ASQ8N1D0 253 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CHCHD4Q8N4Q1 142 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 FITM2Q8N6M3 262 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TEX9Q8N6V9 391 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 ZBTB44Q8NCP5 570 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 FAM46DQ8NEK8 389 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 OR5AR1Q8NGP9 310 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 MAPK15Q8TD08 544 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 BCAS4Q8TDM0 211 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 LMX1AQ8TE12 382 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TRPC4APQ8TEL6 797 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 HOXB13Q92826 284 aaPredicted RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 SLC22A18Q96BI1 424 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 RHBDF1Q96CC6 855 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 MED8Q96G25 268 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PDXPQ96GD0 296 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 C7orf26Q96N11 449 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CAMK1GQ96NX5 476 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PKP4Q99569 1192 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SMAD5Q99717 465 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 ELAC2Q9BQ52 826 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 AIFM2Q9BRQ8 373 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SIKE1Q9BRV8 207 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 NUSAP1Q9BXS6 441 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms