RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PSMF1Q92530 271 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 REPS1Q96D71 796 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 CCDC126Q96EE4 140 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 KCNA7Q96RP8 456 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 SMAD5Q99717 465 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 SLC25A23Q9BV35 468 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 GATA5Q9BWX5 397 aaPredicted RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 ZNF552Q9H707 407 aaPredicted RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 ZBTB20Q9HC78 741 aaPredicted RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 LYRM4Q9HD34 91 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 ATP13A2Q9NQ11 1180 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 TRPS1Q9UHF7 1281 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MYO18BQ8IUG5 2567 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 A0A0A6YYD5 115 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 NSG1A0A0A6YYJ2 146 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 TCRBV16S1A1N1A0A5B0 115 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 CTIFO43310 598 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 TMPRSS11DO60235 418 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 PRMT3O60678 531 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 SEC24DO94855 1032 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 ESRRBO95718 433 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 MLYCDO95822 493 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 PRR35P0CG20 571 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 CHN1P15882 459 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 JAK1P23458 1154 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ALDH3A1P30838 453 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 HPDP32754 393 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 ARL1P40616 181 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 TSFMP43897 325 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 CD97P48960 835 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 HTR6P50406 440 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 FOXA1P55317 472 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 PKNOX1P55347 436 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 HNRNPH2P55795 449 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 TGM3Q08188 693 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 GALNT1Q10472 559 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 TBL3Q12788 808 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 NFATC3Q12968 1075 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 IFT88Q13099 833 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 SLAMF1Q13291 335 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ABRAXAS2Q15018 415 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 NSDHLQ15738 373 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 AP5B1Q2VPB7 878 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 LACTB2Q53H82 288 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 SFT2D3Q587I9 215 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 SGO1Q5FBB7 561 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 CEP85LQ5SZL2 805 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 C10orf62Q5T681 223 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 MFSD4BQ5TF39 518 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 CES4AQ5XG92 561 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 GPRIN3Q6ZVF9 776 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ASB18Q6ZVZ8 466 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 PTRH1Q86Y79 214 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 ZCCHC7Q8N3Z6 543 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 CCNYL1Q8N7R7 359 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 FAM47BQ8NA70 645 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 CLEC1AQ8NC01 280 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 NFAM1Q8NET5 270 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 OR6Y1Q8NGX8 325 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 PPP4R1Q8TF05 950 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 METTL21AQ8WXB1 218 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 UCN3Q969E3 161 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 RGMAQ96B86 450 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 MAGEB10Q96LZ2 347 aaPredicted RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 PTCHD1Q96NR3 888 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 FAM111AQ96PZ2 611 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 SERPINI1Q99574 410 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 SLC29A3Q9BZD2 475 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ROGDIQ9GZN7 287 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 OCEL1Q9H607 264 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 DDX31Q9H8H2 851 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 PRDM9Q9NQV7 894 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 GPR83Q9NYM4 423 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ATG4BQ9Y4P1 393 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 MMACHCQ9Y4U1 282 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 ASB4Q9Y574 426 aa8.02□□□□□ -1.13
UBR1-204ENST00000563239 TNRC6AQ8NDV7 1962 aaKnown RBP8.02□□□□□ -1.13
UBR1-204ENST00000563239 TENM4Q6N022 2769 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 A0A088AWK7 358 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 A0A1W2PR48 441 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 WASHC1A8K0Z3 465 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 B8ZZF3 427 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 PSMD12O00232 456 aaPredicted RBP8.01□□□□□ -1.13
UBR1-204ENST00000563239 RGS16O15492 202 aaPredicted RBP8.01□□□□□ -1.13
UBR1-204ENST00000563239 PROM1O43490 865 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 SEMA3DO95025 777 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 GBAP04062 536 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 SERPINA7P05543 415 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 ENO1P06733 434 aaKnown RBP8.01□□□□□ -1.13
UBR1-204ENST00000563239 ITGAMP11215 1152 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 ZNF10P21506 573 aaPredicted RBP8.01□□□□□ -1.13
UBR1-204ENST00000563239 ITGA3P26006 1051 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 TPP2P29144 1249 aaPredicted RBP8.01□□□□□ -1.13
UBR1-204ENST00000563239 PPP2R1BP30154 601 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 ARRB2P32121 409 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 SOX11P35716 441 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 SSR2P43308 183 aa8.01□□□□□ -1.13
UBR1-204ENST00000563239 PGDP52209 483 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms