RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 OSGIN2Q9Y236 505 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 UBE2J1Q9Y385 318 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 KPTNQ9Y664 436 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 V9GYQ6 96 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 ABCA3Q99758 1704 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CNTNAP2Q9UHC6 1331 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FAM240BA0A1B0GVZ2 78 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PRR19A6NJB7 356 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 M0QZQ0 153 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SDHDO14521 159 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OGG1O15527 345 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 B4GALT5O43286 388 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CNOT3O75175 753 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC43A1O75387 559 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SCELO95171 688 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CBX6O95503 412 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 S1PR4O95977 384 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ANKRD34CP0C6C1 535 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FCGR2AP12318 317 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ZNF8P17098 575 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 UGT1A4P22310 534 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 UGT1A3P35503 534 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 UGT1A5P35504 534 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CHI3L1P36222 383 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 TGFBR2P37173 567 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 GALK1P51570 392 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KPNA2P52292 529 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 JAK3P52333 1124 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ATP6V0D1P61421 351 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 YWHAGP61981 247 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMG1-207ENST00000563235 MGAT3Q09327 533 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 MTAPQ13126 283 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TTLL4Q14679 1199 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TXNRD3NBQ6F5E7 133 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PRR23BQ6ZRT6 265 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC26A9Q7LBE3 791 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 GID4Q8IVV7 300 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ZDHHC23Q8IYP9 409 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 RBFAQ8N0V3 343 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 NAGSQ8N159 534 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PQLC3Q8N755 202 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PROKR2Q8NFJ6 384 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 C9orf43Q8TAL5 461 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 ST8SIA1Q92185 356 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SMPDL3AQ92484 453 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 GTF2H4Q92759 462 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CSPG4P5Q96PW8 444 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PSD2Q9BQI7 771 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ELOVL6Q9H5J4 265 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ARMC1Q9NVT9 282 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CTNNAL1Q9UBT7 734 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC45A2Q9UMX9 530 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 NR2E1Q9Y466 385 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TBL2Q9Y4P3 447 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 KCTD3Q9Y597 815 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 WIF1Q9Y5W5 379 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC22A7Q9Y694 548 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 UBN2Q6ZU65 1347 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SHISA3A0PJX4 238 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TMEM89A2RUT3 159 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TUBAL3A6NHL2 446 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ZNF98A6NK75 572 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ATP6V1G2-DDX39BF2Z307 99 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 P2RY10O00398 339 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 NUPL2O15504 423 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 MGRN1O60291 552 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FCGR3BO75015 233 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 DDNO94850 711 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 ANXA5P08758 320 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CD63P08962 238 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 ZNF28P17035 718 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FCGR2BP31994 310 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 PRDX2P32119 198 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLCO1A2P46721 670 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PLK1P53350 603 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 HSD11B2P80365 405 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC3A1Q07837 685 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FGFBP1Q14512 234 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 SLC15A2Q16348 729 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 EDRF1Q3B7T1 1238 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 AASDHQ4L235 1098 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 XKR7Q5GH72 579 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 CRB2Q5IJ48 1285 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 BRMS1LQ5PSV4 323 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 METTL21CQ5VZV1 264 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 HMBOX1Q6NT76 420 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 TMEM71Q6P5X7 295 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 PRSS55Q6UWB4 352 aaPredicted RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 Q6ZVU0 165 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 TRPM8Q7Z2W7 1104 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 FBXO11Q86XK2 927 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 C1orf52Q8N6N3 182 aaKnown RBP4.54□□□□□ -1.68
SMG1-207ENST00000563235 FBXL13Q8NEE6 735 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OR10S1Q8NGN2 331 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 OR6X1Q8NH79 312 aa4.54□□□□□ -1.68
SMG1-207ENST00000563235 KCTD4Q8WVF5 259 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms