RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GGT1P19440 569 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 PROSER1Q86XN7 944 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 LILRA2Q8N149 483 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 CAMKVQ8NCB2 501 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 FAM110BQ8TC76 370 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ZFP90Q8TF47 636 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 FAM120BQ96EK7 910 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 TRIM15Q9C019 465 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 LRIT1Q9P2V4 623 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 AP4S1Q9Y587 144 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 NUP214P35658 2090 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ELOVL7A1L3X0 281 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 SLC9B1P1A6NJY1 282 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 RHPN2P1A8MT19 583 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 EVPLLA8MZ36 301 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 KIF1CO43896 1103 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 SCELO95171 688 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 MYF5P13349 255 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 DRD2P14416 443 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 SLC7A1P30825 629 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ARRB1P49407 418 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 TGM3Q08188 693 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ABHD18Q0P651 414 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 AASDHQ4L235 1098 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 NKAIN2Q5VXU1 208 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 FAM92BQ6ZTR7 304 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 SLC35F3Q8IY50 421 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ZCCHC10Q8TBK6 192 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 PNPT1Q8TCS8 783 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 RERGQ96A58 199 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 EXOSC8Q96B26 276 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 COPS7BQ9H9Q2 264 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 ZNF282Q9UDV7 671 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 SUSD2Q9UGT4 822 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 MAGEL2Q9UJ55 1249 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 VPS4AQ9UN37 437 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 PCDHGB4Q9UN71 923 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 MRPS2Q9Y399 296 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 FAM220BPB1ANY3 271 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 PGRMC2O15173 223 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 CTSBP07858 339 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 ALDH4A1P30038 563 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 PCBP4P57723 403 aaKnown RBP17.11■□□□□ 0.33
COMMD4-208ENST00000563220 C18orf63Q68DL7 685 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
COMMD4-208ENST00000563220 MICU2Q8IYU8 434 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 PQLC1Q8N2U9 271 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
COMMD4-208ENST00000563220 ZNF764Q96H86 408 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-208ENST00000563220 MAPKAP1Q9BPZ7 522 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 TAS2R9Q9NYW1 312 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 TAS2R7Q9NYW3 318 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 GMEB1Q9Y692 573 aa17.11■□□□□ 0.33
COMMD4-208ENST00000563220 GLOD5A6NK44 160 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 DNAJB6O75190 326 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 C9P02748 559 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 NTRK1P04629 796 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 FRKP42685 505 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 GFERP55789 205 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 VSX2P58304 361 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 DEFB110Q30KQ9 67 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 SERPINA11Q86U17 422 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 ADGRG5Q8IZF4 528 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 FIG4Q92562 907 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 ZC3H10Q96K80 434 aaKnown RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 PKP2Q99959 881 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 FAIM2Q9BWQ8 316 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 C1GALT1Q9NS00 363 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 CCM2LQ9NUG4 571 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 GPATCH2Q9NW75 528 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 FBXO4Q9UKT5 387 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 PDPK1O15530 556 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 PROM1O43490 865 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 KCNK5O95279 499 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 AIFM1O95831 613 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 OR1D5P58170 312 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 SUZ12Q15022 739 aaKnown RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 CYP51A1Q16850 503 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 GATAD2AQ86YP4 633 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 CSNK1A1LQ8N752 337 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 NCSTNQ92542 709 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 REXO5Q96IC2 774 aaKnown RBP17.1■□□□□ 0.33
COMMD4-208ENST00000563220 NSMCE2Q96MF7 247 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 GORASP2Q9H8Y8 452 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 STARD5Q9NSY2 213 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 EHD3Q9NZN3 535 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 UTS2RQ9UKP6 389 aa17.1■□□□□ 0.33
COMMD4-208ENST00000563220 A0A1B0GTQ1 180 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 DHRS12A0PJE2 317 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 URADA6NGE7 173 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 GSTA4O15217 222 aa17.09■□□□□ 0.33
COMMD4-208ENST00000563220 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 NUDT21O43809 227 aaKnown RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 SMNDC1O75940 238 aaKnown RBP eCLIP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 EPHA8P29322 1005 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 PPM1FP49593 454 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-208ENST00000563220 MVDP53602 400 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms