RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RP1L1Q8IWN7 2480 aaPredicted RBP14.77□□□□□ -0.04
USB1-208ENST00000563207 TEX15Q9BXT5 2789 aa14.77□□□□□ -0.04
USB1-208ENST00000563207 SCN3AQ9NY46 2000 aa14.77□□□□□ -0.04
USB1-208ENST00000563207 IGLV3-12A0A075B6K2 115 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 A0A0A6YYC8 382 aaPredicted RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 TMEM120BA0PK00 339 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 LRIT2A6NDA9 550 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 OR2W5A6NFC9 320 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 H0YIG0 161 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 I3L1I5 382 aaPredicted RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 FOXE1O00358 373 aaPredicted RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 SASH3O75995 380 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 SNUPNO95149 360 aaKnown RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 ESRRBO95718 433 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 CLDN1O95832 211 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 F10P00742 488 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 SERPIND1P05546 499 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 ENO1P06733 434 aaKnown RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 AVPR1BP47901 424 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 ARFIP1P53367 373 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 OCA2Q04671 838 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 TGM3Q08188 693 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 CPSF6Q16630 551 aaKnown RBP eCLIP14.77□□□□□ -0.05
USB1-208ENST00000563207 ADPRMQ3LIE5 342 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 TMEM35AQ53FP2 167 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 CHSY3Q70JA7 882 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 PRSS41Q7RTY9 318 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 KCT2Q8NC54 265 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 DNAJB14Q8TBM8 379 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 ZNF473Q8WTR7 871 aaKnown RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 PSMF1Q92530 271 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 ARL8AQ96BM9 186 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 CMTM7Q96FZ5 175 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 WDR77Q9BQA1 342 aaPredicted RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 GATA5Q9BWX5 397 aaPredicted RBP14.77□□□□□ -0.05
USB1-208ENST00000563207 SLC29A3Q9BZD2 475 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 LHPPQ9H008 270 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 ANKHQ9HCJ1 492 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 NKIRAS1Q9NYS0 192 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 PLA2G3Q9NZ20 509 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 TRPC4Q9UBN4 977 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 SNX6Q9UNH7 406 aa14.77□□□□□ -0.05
USB1-208ENST00000563207 A0A088AWK7 358 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ANKUB1A6NFN9 424 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 JRKO75564 520 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 NSA2O95478 260 aaKnown RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 PCNAP12004 261 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 COX6A1P12074 109 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ACPPP15309 386 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ALOX12P18054 663 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ZNF10P21506 573 aaPredicted RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 HYAL2Q12891 473 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 IFT88Q13099 833 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 MPP2Q14168 576 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ZRSR2Q15696 482 aaKnown RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 HHATQ5VTY9 493 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 AGAP7PQ5VUJ5 663 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 FRG2Q64ET8 278 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 TTC19Q6DKK2 380 aaPredicted RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 LETMD1Q6P1Q0 360 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 RPS27LQ71UM5 84 aaKnown RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 HUS1BQ8NHY5 278 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 WDR20Q8TBZ3 569 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 GRHL3Q8TE85 626 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 GAL3ST3Q96A11 431 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 NACC2Q96BF6 587 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ZBTB9Q96C00 473 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 MMABQ96EY8 250 aaPredicted RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 AGAP4Q96P64 663 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 CDK15Q96Q40 435 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 FRG2BQ96QU4 278 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 CENPKQ9BS16 269 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 MECRQ9BV79 373 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 ELOVL6Q9H5J4 265 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 EML4Q9HC35 981 aaKnown RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 ZNF225Q9UK10 706 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 NXT1Q9UKK6 140 aaKnown RBP14.76□□□□□ -0.05
USB1-208ENST00000563207 CELSR2Q9HCU4 2923 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 CROCCQ5TZA2 2017 aa14.76□□□□□ -0.05
USB1-208ENST00000563207 IDSB3KWA1 339 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 PPP6CO00743 305 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 HPP00738 406 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 LDLRP01130 860 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 KRT6AP02538 564 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 KRT6BP04259 564 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 SMIM10L1P0DMW3 83 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 GRK2P25098 689 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 TSFMP43897 325 aaKnown RBP14.75□□□□□ -0.05
USB1-208ENST00000563207 KRT6CP48668 564 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 ST13P50502 369 aaKnown RBP14.75□□□□□ -0.05
USB1-208ENST00000563207 EMP2P54851 167 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 DSG2Q14126 1118 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 DEPDC1Q5TB30 811 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 B3GNTL1Q67FW5 361 aaPredicted RBP14.75□□□□□ -0.05
USB1-208ENST00000563207 VN1R5Q7Z5H4 357 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 SIRT6Q8N6T7 355 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 OR2L5Q8NG80 312 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 OR9A4Q8NGU2 314 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms