RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CERS1P27544 350 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SSR2P43308 183 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 HTR6P50406 440 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 RAP1GDS1P52306 607 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 HSD17B7P56937 341 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SOX8P57073 446 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 ABCE1P61221 599 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 RHDQ02161 417 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SLAMF1Q13291 335 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 CHI3L2Q15782 390 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 TCHHL1Q5QJ38 904 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM69BQ5VUD6 431 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 GALNT18Q6P9A2 607 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 C19orf48Q6RUI8 117 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 KIRREL2Q6UWL6 708 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 NUDT13Q86X67 352 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 TTC9Q92623 222 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 WBP1Q96G27 269 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 CRELD1Q96HD1 420 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 VPS50Q96JG6 964 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 CCT7Q99832 543 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 YIPF2Q9BWQ6 316 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 ACPTQ9BZG2 426 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 C20orf27Q9GZN8 174 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 VN1R1Q9GZP7 353 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 PRDM9Q9NQV7 894 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 LYARQ9NX58 379 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 NKIRAS1Q9NYS0 192 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 MKL2Q9ULH7 1088 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 SLC12A4Q9UP95 1085 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 RAP2CQ9Y3L5 183 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 TRAF6Q9Y4K3 522 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 MMACHCQ9Y4U1 282 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 ASB4Q9Y574 426 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 CLDN16Q9Y5I7 305 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 DNAJC15Q9Y5T4 150 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 KCNMB2Q9Y691 235 aa9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-221ENST00000561055 WDR91A4D1P6 747 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CDC14CA4D256 554 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SLC28A1O00337 649 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SAP18O00422 153 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CLDN4O14493 209 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 PROM1O43490 865 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ITM2AO43736 263 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CTNSO60931 367 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SNNO75324 88 aaPredicted RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ALOX12BO75342 701 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SH3BGRLO75368 114 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 EEDO75530 441 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 JRKO75564 520 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 HEXBP07686 556 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM58BPP0C7Q3 252 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CHN1P15882 459 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 TPP2P29144 1249 aaPredicted RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SERPINB3P29508 390 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 OTX2P32243 289 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 GSTM5P46439 218 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SLC1A6P48664 564 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 HNRNPH2P55795 449 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 FOXL2P58012 376 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 TRA2BP62995 288 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 OLR1P78380 273 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 STX3Q13277 289 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 BIKQ13323 160 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 KIAA0040Q15053 153 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SPIN4Q56A73 249 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ATP1A1-AS1Q5TC04 95 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CLEC6AQ6EIG7 209 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 BORAQ6PGQ7 559 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 Q6ZSR9 355 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 COMMD6Q7Z4G1 85 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 MRGPREQ86SM8 312 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 GPR180Q86V85 440 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SCUBE1Q8IWY4 988 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 TRIM42Q8IWZ5 723 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ANKRD42Q8N9B4 389 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 OR11G2Q8NGC1 345 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM76AQ8TAV0 307 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 APOBEC4Q8WW27 367 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 FER1L6-AS2Q96M78 137 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SORT1Q99523 831 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 MAPKAP1Q9BPZ7 522 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SORBS1Q9BX66 1292 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 MRPL1Q9BYD6 325 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF700Q9H0M5 742 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 TUBB1Q9H4B7 451 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 P4HTMQ9NXG6 502 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 ZDHHC2Q9UIJ5 367 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 MRPS33Q9Y291 106 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 SPACA6W5XKT8 324 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 CNTRLQ7Z7A1 2325 aa9.06□□□□□ -0.96
RABGGTA-221ENST00000561055 FASNP49327 2511 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms