RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	VPS39	Q96JC1	886 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	RUNDC3B	Q96NL0	473 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	SERINC2	Q96SA4	455 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	RHOJ	Q9H4E5	214 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	ADAP2	Q9NPF8	381 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	TIMMDC1	Q9NPL8	285 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	DEPP	Q9NTK1	212 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	NSMCE4A	Q9NXX6	385 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	MYOT	Q9UBF9	498 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	NIN	Q8N4C6	2090 aa		12.69	□□□□□ -0.38
RNF31-223	ENST00000560754	FREM3	P0C091	2139 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754		A0A088AWK7	358 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754		A0A0G2JN53	185 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	OR2J2	O76002	312 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	TUBB4A	P04350	444 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	TPO	P07202	933 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	ZNF10	P21506	573 aa	Predicted RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	RFC3	P40938	356 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	CASP2	P42575	452 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	NR0B1	P51843	470 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	PLA2G16	P53816	162 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	LIM2	P55344	173 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	POU4F1	Q01851	419 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	PDIA2	Q13087	525 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	SLC13A2	Q13183	592 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	SLBP	Q14493	270 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.68	□□□□□ -0.38	4e-8	■■■■■ 42.6
RNF31-223	ENST00000560754	SPNS3	Q6ZMD2	512 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	RGS9BP	Q6ZS82	235 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	TCAIM	Q8N3R3	496 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	MORN4	Q8NDC4	146 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	PSD4	Q8NDX1	1056 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	OR8K3	Q8NH51	312 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	ASB5	Q8WWX0	329 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	KIAA1191	Q96A73	305 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	CAPZA3	Q96KX2	299 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	CCDC77	Q9BR77	488 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	ALOXE3	Q9BYJ1	711 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	REXO4	Q9GZR2	422 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	TP63	Q9H3D4	680 aa	Predicted RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	ZDHHC11	Q9H8X9	412 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	SMYD2	Q9NRG4	433 aa		12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	PTBP2	Q9UKA9	531 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	MRPS33	Q9Y291	106 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	MTO1	Q9Y2Z2	717 aa	Known RBP	12.68	□□□□□ -0.38
RNF31-223	ENST00000560754	PINLYP	A6NC86	204 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	PDE9A	O76083	593 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	TOX	O94900	526 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	CNR1	P21554	472 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	KCNC1	P48547	511 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	MTTP	P55157	894 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	RIPPLY3	P57055	190 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	GPR85	P60893	370 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	TLE4	Q04727	773 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	TFF3	Q07654	80 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	PCDH1	Q08174	1060 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	BMPR2	Q13873	1038 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	DOC2A	Q14183	400 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	RCN2	Q14257	317 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	FASTKD3	Q14CZ7	662 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	GXYLT1	Q4G148	440 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	SULT1C3	Q6IMI6	304 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	TRIM40	Q6P9F5	258 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	PAOX	Q6QHF9	649 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	MEX3B	Q6ZN04	569 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	CEP128	Q6ZU80	1094 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	UBE3D	Q7Z6J8	389 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	CD163	Q86VB7	1156 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	KLHL7	Q8IXQ5	586 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	OR2M7	Q8NG81	312 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	DAZL	Q92904	295 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	PTCD3	Q96EY7	689 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	UBXN10	Q96LJ8	280 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	TMEM79	Q9BSE2	394 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	DEFB127	Q9H1M4	99 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	CNOT10	Q9H9A5	744 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	LIN28A	Q9H9Z2	209 aa	Known RBP	12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	DNAJC11	Q9NVH1	559 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	ERVK-11	Q9UQG0	969 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	RNF6	Q9Y252	685 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	CLCA3P	Q9Y6N3	262 aa		12.67	□□□□□ -0.38
RNF31-223	ENST00000560754	AKAP9	Q99996	3911 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754		A0A1B0GVC2	190 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	USP27X	A6NNY8	438 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754		A8MVJ9	347 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CCDC188	H7C350	402 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CLGN	O14967	610 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CDC40	O60508	579 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	STK16	O75716	305 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	GLS	O94925	669 aa	Predicted RBP	12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	OR6B1	O95007	311 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	IGHG3	P01860	377 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CCDC166	P0CW27	439 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	EPOR	P19235	508 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CD22	P20273	847 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	CHRNB4	P30926	498 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	SOX3	P41225	446 aa		12.66	□□□□□ -0.38
RNF31-223	ENST00000560754	HK2	P52789	917 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms