RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SORBS1Q9BX66 1292 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 FANCEQ9HB96 536 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ANKHQ9HCJ1 492 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 LYRM4Q9HD34 91 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SH3BP4Q9P0V3 963 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM181Q9P2C4 612 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ABCD2Q9UBJ2 740 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 BCAP29Q9UHQ4 241 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 PSME2Q9UL46 239 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 EXO1Q9UQ84 846 aaKnown RBP8.17□□□□□ -1.1
TRAF3-209ENST00000560463 ASB4Q9Y574 426 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
TRAF3-209ENST00000560463 A0A0G2JN53 185 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 A0A1W2PQM1 296 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 BLACEA4D250 179 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 C4orf51C9J302 202 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 FXYD1O00168 92 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 RFXANKO14593 260 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PROM1O43490 865 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SH3BP5O60239 455 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF292O60281 2723 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 GALR3O60755 368 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 CIB2O75838 187 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ANP32DO95626 131 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 STATHP02808 62 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 RPLP0P05388 317 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 LAMP1P11279 417 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 MYF5P13349 255 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PPIBP23284 216 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ME2P23368 584 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 CSF2RBP32927 897 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 FRKP42685 505 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 WNT3P56703 355 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PHC1P78364 1004 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 MC1RQ01726 317 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TRA2AQ13595 282 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 GRM7Q14831 915 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 MLC1Q15049 377 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PRTGQ2VWP7 1150 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 DEFB110Q30KQ9 67 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 RUNDC3AQ59EK9 446 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PIGGQ5H8A4 983 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SAMD4BQ5PRF9 694 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 C6orf10Q5SRN2 563 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 NDUFAF5Q5TEU4 345 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 YOD1Q5VVQ6 348 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TCEAL6Q6IPX3 200 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 NANOGP8Q6NSW7 305 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 GPR179Q6PRD1 2367 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 USP53Q70EK8 1073 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ARHGAP22Q7Z5H3 698 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 NET1Q7Z628 596 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 C10orf67Q8IYJ2 551 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SAMD14Q8IZD0 417 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ARHGEF39Q8N4T4 335 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TRIML2Q8N7C3 387 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TTC29Q8NA56 475 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 FAM47BQ8NA70 645 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ZCCHC10Q8TBK6 192 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ADAMTS18Q8TE60 1221 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 RHBDD1Q8TEB9 315 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TCEAL3Q969E4 200 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SLC45A3Q96JT2 553 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ANKRD27Q96NW4 1050 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PHF12Q96QT6 1004 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PANX1Q96RD7 426 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 GFM1Q96RP9 751 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 CGREF1Q99674 301 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PAIP1Q9H074 479 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 NANOGQ9H9S0 305 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TMEM9BQ9NQ34 198 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SERHLQ9NQF3 203 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 TEX10Q9NXF1 929 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ADA2Q9NZK5 511 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 ZNF282Q9UDV7 671 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 FTSJ1Q9UET6 329 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 KLHL3Q9UH77 587 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 DAPP1Q9UN19 280 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PCDHGB4Q9UN71 923 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 BTBD3Q9Y2F9 522 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 L3MBTL1Q9Y468 752 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 PCDHA9Q9Y5H5 950 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 GMEB1Q9Y692 573 aa8.16□□□□□ -1.1
TRAF3-209ENST00000560463 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.16□□□□□ -1.1
TRAF3-209ENST00000560463 EXPH5Q8NEV8 1989 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 TRBV5-3A0A0A0MS03 114 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 HYKKA2RU49 373 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 H0YIG0 161 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NTN3O00634 580 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NME4O00746 187 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 CDX4O14627 284 aaPredicted RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 PDPK1O15530 556 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 HCRTR1O43613 425 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NSA2O95478 260 aaKnown RBP8.15□□□□□ -1.1
TRAF3-209ENST00000560463 NR2F6P10588 404 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 HSD17B1P14061 328 aa8.15□□□□□ -1.1
TRAF3-209ENST00000560463 HOXB9P17482 250 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms