RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 RECKO95980 971 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 LINC00032P0C843 101 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 RNH1P13489 461 aaKnown RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 FOLR3P41439 243 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 RAB38P57729 211 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 FAM47BQ8NA70 645 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 ADAMTS17Q8TE56 1095 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 CKAP2Q8WWK9 683 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 TBC1D20Q96BZ9 403 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 C11orf24Q96F05 449 aaPredicted RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 CRELD1Q96HD1 420 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 C3orf30Q96M34 536 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 OR1F2PQ96R84 312 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 EFHD1Q9BUP0 239 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 GIMAP2Q9UG22 337 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 NXT1Q9UKK6 140 aaKnown RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 PADI2Q9Y2J8 665 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 NPIPB8E9PQR5 432 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 RSL1D1O76021 490 aaKnown RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 CHEK2O96017 543 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 KLK1P06870 262 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 FHP07954 510 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 RPL14P50914 215 aaKnown RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 BTKQ06187 659 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 SLAMF1Q13291 335 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 PDCD2Q16342 344 aaPredicted RBP20.53■□□□□ 0.88
SNX1-210ENST00000560260 IMPG1Q17R60 797 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 DDIASQ8IXT1 998 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 LRRC8CQ8TDW0 803 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 DYDC1Q8WWB3 177 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 CRB3Q9BUF7 120 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 VN1R1Q9GZP7 353 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 LYRM4Q9HD34 91 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 SLCO1B3Q9NPD5 702 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 FBXW2Q9UKT8 454 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 ASB4Q9Y574 426 aa20.53■□□□□ 0.88
SNX1-210ENST00000560260 LOC400499M0QZD8 3231 aa20.52■□□□□ 0.88
SNX1-210ENST00000560260 PTPRQQ9UMZ3 2332 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 SLC28A1O00337 649 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 CYR61O00622 381 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 PRKRAO75569 313 aaKnown RBP20.52■□□□□ 0.87
SNX1-210ENST00000560260 SNUPNO95149 360 aaKnown RBP20.52■□□□□ 0.87
SNX1-210ENST00000560260 PRKAR1AP10644 381 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 PRPH2P23942 346 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 RHAGQ02094 409 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 BROXQ5VW32 411 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 CCDC81Q6ZN84 652 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 RIPOR1Q6ZS17 1223 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 PPP1R32Q7Z5V6 425 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 NMRK1Q9NWW6 199 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 AHSPQ9NZD4 102 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 MARCOQ9UEW3 520 aaPredicted RBP20.52■□□□□ 0.87
SNX1-210ENST00000560260 C3orf18Q9UK00 162 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 ADAM29Q9UKF5 820 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 ATG4BQ9Y4P1 393 aa20.52■□□□□ 0.87
SNX1-210ENST00000560260 SCN2AQ99250 2005 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 ZNF891A8MT65 544 aaPredicted RBP20.51■□□□□ 0.87
SNX1-210ENST00000560260 IDSB3KWA1 339 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 TGFBR3LH3BV60 316 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 LSM1O15116 133 aaKnown RBP20.51■□□□□ 0.87
SNX1-210ENST00000560260 B4GALT2O60909 372 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 CD63P08962 238 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 CDC20Q12834 499 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 KIAA0040Q15053 153 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 ST3GAL2Q16842 350 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 UGT8Q16880 541 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 TUBB8Q3ZCM7 444 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 MINDY4Q4G0A6 757 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 SPIN4Q56A73 249 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 SPDYAQ5MJ70 313 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 MED25Q71SY5 747 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 EFCAB3Q8N7B9 438 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 TSLPQ969D9 159 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 UCN3Q969E3 161 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 C19orf60Q96EN9 201 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 EBPLQ9BY08 206 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 TEX10Q9NXF1 929 aaPredicted RBP20.51■□□□□ 0.87
SNX1-210ENST00000560260 MKL2Q9ULH7 1088 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 HS3ST3B1Q9Y662 390 aa20.51■□□□□ 0.87
SNX1-210ENST00000560260 ATP6AP2A0A1C7CYW4 349 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 A0A1W2PR48 441 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 CDC14CA4D256 554 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 K7ENP7 123 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 RGS14O43566 566 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 PCDH7O60245 1069 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 ATP6AP2O75787 350 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 FAM58BPP0C7Q3 252 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 IL10P22301 178 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 TIA1P31483 386 aaKnown RBP eCLIP20.5■□□□□ 0.879e-6■□□□□ 8.2
SNX1-210ENST00000560260 OTX2P32243 289 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 EMP2P54851 167 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 TMPRSS3P57727 454 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 BTG2P78543 158 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 TNFRSF17Q02223 184 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 ACSM2AQ08AH3 577 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 NR6A1Q15406 480 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 CCNYL2Q5T2Q4 361 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 ACSM2BQ68CK6 577 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 C18orf63Q68DL7 685 aa20.5■□□□□ 0.87
SNX1-210ENST00000560260 GALNT18Q6P9A2 607 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms