RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 RHOJQ9H4E5 214 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 LIN28AQ9H9Z2 209 aaKnown RBP16.18■□□□□ 0.18
CRTC3-208ENST00000560098 DEPPQ9NTK1 212 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 NSMCE4AQ9NXX6 385 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 MYOTQ9UBF9 498 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 CLCA3PQ9Y6N3 262 aa16.18■□□□□ 0.18
CRTC3-208ENST00000560098 CYR61O00622 381 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 FANCGO15287 622 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 SEC31AO94979 1220 aaKnown RBP16.17■□□□□ 0.18
CRTC3-208ENST00000560098 CHRNB4P30926 498 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 MTTPP55157 894 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 LIM2P55344 173 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
CRTC3-208ENST00000560098 RCN2Q14257 317 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 FASTKD3Q14CZ7 662 aaKnown RBP16.17■□□□□ 0.18
CRTC3-208ENST00000560098 XKR6Q5GH73 641 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 ABHD17CQ6PCB6 329 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 PAOXQ6QHF9 649 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 IL20RBQ6UXL0 311 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 HSDL2Q6YN16 418 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 VN1R5Q7Z5H4 357 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 CDH24Q86UP0 819 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 TCAIMQ8N3R3 496 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 DAZLQ92904 295 aaKnown RBP16.17■□□□□ 0.18
CRTC3-208ENST00000560098 CAPZA3Q96KX2 299 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 CSF3RQ99062 836 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 TMEM79Q9BSE2 394 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 MCMBPQ9BTE3 642 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 DERL2Q9GZP9 239 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 DEFB127Q9H1M4 99 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 EHD1Q9H4M9 534 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 DNAJC11Q9NVH1 559 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 DAPP1Q9UN19 280 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 HIVEP1P15822 2718 aa16.17■□□□□ 0.18
CRTC3-208ENST00000560098 PINLYPA6NC86 204 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 CLGNO14967 610 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 TP73O15350 636 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 TAPBPO15533 448 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 CTNSO60931 367 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 OR6B1O95007 311 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 IFNA16P05015 189 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 IGFBP2P18065 325 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 CERS1P27544 350 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 GGT5P36269 586 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 NR0B1P51843 470 aaKnown RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 SLC12A2P55011 1212 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 PPIAP62937 165 aaKnown RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 ILF2Q12905 390 aaKnown RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 EFTUD2Q15029 972 aaKnown RBP eCLIP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 TESK1Q15569 626 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 ADNP2Q6IQ32 1131 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 MORN4Q8NDC4 146 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 OR2M7Q8NG81 312 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 LILRB4Q8NHJ6 448 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 RND1Q92730 232 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 RASL10BQ96S79 203 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 CNOT10Q9H9A5 744 aaKnown RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 COPS7BQ9H9Q2 264 aaPredicted RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 WWOXQ9NZC7 414 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 VTI1BQ9UEU0 232 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 ZNF490Q9ULM2 529 aaPredicted RBP16.16■□□□□ 0.18
CRTC3-208ENST00000560098 RNF6Q9Y252 685 aa16.16■□□□□ 0.18
CRTC3-208ENST00000560098 E7ESA3 106 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 ACOT7O00154 380 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 WWP2O00308 870 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PRAMEF4O60810 478 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 WISP3O95389 354 aaPredicted RBP16.15■□□□□ 0.18
CRTC3-208ENST00000560098 SOX3P41225 446 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 POU4F1Q01851 419 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PLGLB1Q02325 96 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 TGM3Q08188 693 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 EMC4Q5J8M3 183 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 CDKL4Q5MAI5 379 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PRAMEF9Q5VWM5 478 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 RGS9BPQ6ZS82 235 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 GPSM1Q86YR5 675 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 SPATA6LQ8N4H0 392 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 RPRMLQ8N4K4 120 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 OR14A16Q8NHC5 309 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PTPMT1Q8WUK0 201 aaPredicted RBP16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PTCD3Q96EY7 689 aaKnown RBP16.15■□□□□ 0.18
CRTC3-208ENST00000560098 ALOXE3Q9BYJ1 711 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 TRIM31Q9BZY9 425 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 ZDHHC11Q9H8X9 412 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 CAB39LQ9H9S4 337 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 PRDM7Q9NQW5 492 aa16.15■□□□□ 0.18
CRTC3-208ENST00000560098 NPDC1Q9NQX5 325 aaPredicted RBP16.15■□□□□ 0.18
CRTC3-208ENST00000560098 NKX2-6A6NCS4 301 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 FAM90A27PA6NNH2 459 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 FAM166BA8MTA8 275 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 PIAS1O75925 651 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 KCNC1P48547 511 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 HSPA7P48741 367 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 TFF3Q07654 80 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 STX4Q12846 297 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 DOC2AQ14183 400 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 FBXO48Q5FWF7 155 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 SULT1C3Q6IMI6 304 aa16.14■□□□□ 0.17
CRTC3-208ENST00000560098 ACAD11Q709F0 780 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms