RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CRB1P82279 1406 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 J3QR89 54 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 TXNL1O43396 289 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ADAP00813 363 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 KLK1P06870 262 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PBX3P40426 434 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 FMO1Q01740 532 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 GPR142Q7Z601 462 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 DNAJC22Q8N4W6 341 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CNOT9Q92600 299 aaKnown RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 FBXL8Q96CD0 374 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ARHGAP9Q9BRR9 750 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ADAM19Q9H013 955 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 B3GNT2Q9NY97 397 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 NEO1Q92859 1461 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCDH17O14917 1159 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC2A1P11166 492 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 EDNRBP24530 442 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ARHGAP40Q5TG30 622 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRC52Q8N7C0 313 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 C12orf29Q8N999 325 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ENPP3O14638 875 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 DCBLD1Q8N8Z6 715 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 SPRYD4Q8WW59 207 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 POLDIP3Q9BY77 421 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 IGSF9Q9P2J2 1179 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RAB19A4D1S5 217 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 A6NLC8 198 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRTM2O43300 516 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 CBSLP0DN79 551 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RAB6AP20340 208 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 CBSP35520 551 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TGFBIQ15582 683 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RAB11BQ15907 218 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 BCL2L15Q5TBC7 163 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 C16orf78Q8WTQ4 265 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TP63Q9H3D4 680 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 POLE4Q9NR33 117 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 PAQR5Q9NXK6 330 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 E9PI62 339 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TRAM2Q15035 370 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF705AQ6ZN79 300 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 CHRAC1Q9NRG0 131 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 NAALAD2Q9Y3Q0 740 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 EEF1E1-BLOC1S5C9J1V9 151 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TAS2R40P59535 323 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF423Q2M1K9 1284 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 CBY1Q9Y3M2 126 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 FSCN2O14926 492 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 UCHL1P09936 223 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 CRYBB1P53674 252 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RPS3AP61247 264 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RPL23AP62750 156 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 PRMT8Q9NR22 394 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 IL36AQ9UHA7 158 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 EFCAB7A8K855 629 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ECI2O75521 394 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 TGFB1P01137 390 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 NMBRP28336 390 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 NUDT6P53370 316 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 YBEYP58557 167 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 RPL7AP62424 266 aaKnown RBP13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 SDSLQ96GA7 329 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
CSPG4P12-202ENST00000559989 ADAM10O14672 748 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 CEACAM19Q7Z692 300 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRC57Q8N9N7 239 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR5AK3PQ8NH89 298 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 GPR152Q8TDT2 470 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 TLE6Q9H808 572 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 CXCL11O14625 94 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PHYHO14832 338 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SGCEO43556 437 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 FADS1O60427 444 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 NOMO3P69849 1222 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PRAMEF14Q5SWL7 426 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 TSTD2Q5T7W7 516 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 TCEANCQ8N8B7 351 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms