RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 DRD2P14416 443 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 MYOGP15173 224 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 RHCEP18577 417 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PKLRP30613 574 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SOAT1P35610 550 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 XCR1P46094 333 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 LIMS1P48059 325 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ANXA11P50995 505 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 RPP38P78345 283 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ABATP80404 500 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 KCNC4Q03721 635 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SIM2Q14190 667 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 IRF4Q15306 451 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SHHQ15465 462 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SLC5A12Q1EHB4 618 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF829Q3KNS6 432 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ITPRIPL2Q3MIP1 535 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM35AQ53FP2 167 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SYT6Q5T7P8 510 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ANGPTL8Q6UXH0 198 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM184AQ6ZMB5 413 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF605Q86T29 641 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SFTPA1Q8IWL2 248 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 DEPDC4Q8N2C3 294 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PARP8Q8N3A8 854 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TBC1D19Q8N5T2 526 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ANKRD53Q8N9V6 530 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 OR10G2Q8NGC3 310 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 CNIH3Q8TBE1 160 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 RASSF5Q8WWW0 418 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 RORBQ92753 470 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 CIDECQ96AQ7 238 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ELSPBP1Q96BH3 223 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PPP1R14BQ96C90 147 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 TM4SF18Q96CE8 201 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ZBED6CLQ96FA7 236 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 CAMK1GQ96NX5 476 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PIP5K1AQ99755 562 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 DCUN1D5Q9BTE7 237 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SARGQ9BW04 601 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 FUNDC2Q9BWH2 189 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 SLC6A16Q9GZN6 736 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 CXorf36Q9H7Y0 433 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 DDX31Q9H8H2 851 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 LTB4R2Q9NPC1 389 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 NECTIN3Q9NQS3 549 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 EXD2Q9NVH0 621 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PAK1IP1Q9NWT1 392 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 ETAA1Q9NY74 926 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 WARS2Q9UGM6 360 aaKnown RBP7.71□□□□□ -1.18
SMAD3-212ENST00000559937 PCDHGA10Q9Y5H3 936 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 HEBP2Q9Y5Z4 205 aa7.71□□□□□ -1.18
SMAD3-212ENST00000559937 LRP4O75096 1905 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 A0A1B0GVG6 124 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SH3PXD2BA1X283 911 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PTGES3LE9PB15 166 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SAP18O00422 153 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PLRG1O43660 514 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 XPNPEP2O43895 674 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 GUCY1B2O75343 617 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 CLPXO76031 633 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 OXSR1O95747 527 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MT-ND2P03891 347 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 GBAP04062 536 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 IFNW1P05000 195 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 HOXC4P09017 264 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FMO3P31513 532 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 TSFMP43897 325 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 RAB28P51157 221 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 CLCNKAP51800 687 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PCBP4P57723 403 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 RPS21P63220 83 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 CSNK1G2P78368 415 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 IL1RL1Q01638 556 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SPIBQ01892 262 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 EMX1Q04741 257 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PRDX1Q06830 199 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 NPTX1Q15818 432 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MICAQ29983 383 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PRSS53Q2L4Q9 553 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ADPRMQ3LIE5 342 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 C2orf27AQ580R0 203 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FGD3Q5JSP0 725 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 C9orf50Q5SZB4 431 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 UBE2UQ5VVX9 321 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SLC16A12Q6ZSM3 486 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 Q7L0L9 218 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 RNF130Q86XS8 419 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 P3H2Q8IVL5 708 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ENTHD1Q8IYW4 607 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ADGRF3Q8IZF5 1079 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 LGI4Q8N135 537 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 HDDC3Q8N4P3 179 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 DEFB123Q8N688 67 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 DENND6BQ8NEG7 585 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms