RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 MAPKAP1Q9BPZ7 522 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 SIKE1Q9BRV8 207 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 ZNF717Q9BY31 904 aaPredicted RBP13.56□□□□□ -0.24
SMAD6-204ENST00000559931 MKKSQ9NPJ1 570 aaPredicted RBP13.56□□□□□ -0.24
SMAD6-204ENST00000559931 PHF11Q9UIL8 331 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 G3BP2Q9UN86 482 aaKnown RBP13.56□□□□□ -0.24
SMAD6-204ENST00000559931 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 AHCTF1Q8WYP5 2266 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 APC2O95996 2303 aa13.56□□□□□ -0.24
SMAD6-204ENST00000559931 URB1O60287 2271 aaKnown RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 A0A0A6YYD5 115 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 FAM227AF5H4B4 570 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 ZNF195O14628 629 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 TMPRSS11DO60235 418 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 B4GALT2O60909 372 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 CD63P08962 238 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 DLSTP36957 453 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 PCBP4P57723 403 aaKnown RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 RAE1P78406 368 aaKnown RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 EMX2Q04743 252 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 ERV3-1Q14264 604 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 IL23RQ5VWK5 629 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 UNQ6494/PRO21346Q6UXR6 183 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 CEP70Q8NHQ1 597 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 ACTRT2Q8TDY3 377 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 CT55Q8WUE5 264 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 NKD1Q969G9 470 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 KIAA1143Q96AT1 154 aaPredicted RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 TBC1D20Q96BZ9 403 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 MIEF2Q96C03 454 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 NAF1Q96HR8 494 aaKnown RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 RBCK1Q9BYM8 510 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 RABEP2Q9H5N1 569 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
SMAD6-204ENST00000559931 WDR41Q9HAD4 459 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 SLC22A11Q9NSA0 550 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 MS4A12Q9NXJ0 267 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
SMAD6-204ENST00000559931 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 SCELO95171 688 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ONECUT2O95948 504 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ALBP02768 609 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 LIPCP11150 499 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ALOX15P16050 662 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 IL10P22301 178 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ALDH9A1P49189 494 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ARFIP2P53365 341 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 RAB38P57729 211 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 TAS2R50P59544 299 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 TRA2BP62995 288 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ERVK-8P63133 956 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 KIAA0040Q15053 153 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 TGIF1Q15583 401 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 SMU1Q2TAY7 513 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 VWA2Q5GFL6 755 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 RIPOR1Q6ZS17 1223 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 SHISA6Q6ZSJ9 500 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 COX15Q7KZN9 410 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 PARP9Q8IXQ6 854 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 LIX1Q8N485 282 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 FAM47BQ8NA70 645 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 STT3BQ8TCJ2 826 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ADAMTS18Q8TE60 1221 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 C16orf78Q8WTQ4 265 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 FKBP10Q96AY3 582 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ELAC2Q9BQ52 826 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 EBF4Q9BQW3 602 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 FAIM2Q9BWQ8 316 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 SIRT5Q9NXA8 310 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 NOP53Q9NZM5 478 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 KCMF1Q9P0J7 381 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 CTSFQ9UBX1 484 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 BAIAP2L1Q9UHR4 511 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 CROTQ9UKG9 612 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
SMAD6-204ENST00000559931 DLGAP4Q9Y2H0 992 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 PADI2Q9Y2J8 665 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ATG4BQ9Y4P1 393 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 ASB4Q9Y574 426 aa13.54□□□□□ -0.24
SMAD6-204ENST00000559931 LOC101059948A0A1B0GTJ6 334 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms