RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 SREK1Q8WXA9 508 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 NPAS2Q99743 824 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 C12orf65Q9H3J6 166 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 PNO1Q9NRX1 252 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 ASF1BQ9NVP2 202 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 EMCNQ9ULC0 261 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 DAPP1Q9UN19 280 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 PCDHGA11Q9Y5H2 935 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 CLDN16Q9Y5I7 305 aa13.91□□□□□ -0.18
RABGGTA-211ENST00000559850 H0YIV9 168 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 CYR61O00622 381 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 PLPP1O14494 284 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 WDPCPO95876 746 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 ICAM2P13598 275 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 KRT15P19012 456 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 HIST1H1TP22492 207 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 GNLYP22749 145 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 SERPINB1P30740 379 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 HPDP32754 393 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 SLAMF1Q13291 335 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF169Q14929 603 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 EXT1Q16394 746 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 AP5B1Q2VPB7 878 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 TMEM35AQ53FP2 167 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 UNC50Q53HI1 259 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 OR4C11Q6IEV9 310 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 CHSY3Q70JA7 882 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 SCUBE1Q8IWY4 988 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 IQCKQ8N0W5 287 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 BEST3Q8N1M1 668 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 TRPC4APQ8TEL6 797 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 SNRNP40Q96DI7 357 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 LMF1Q96S06 567 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 TBCDQ9BTW9 1192 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 CLMPQ9H6B4 373 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 FARSBQ9NSD9 589 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 ANKRD10Q9NXR5 420 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 KCMF1Q9P0J7 381 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 MMACHCQ9Y4U1 282 aa13.9□□□□□ -0.18
RABGGTA-211ENST00000559850 TLDC2A0PJX2 215 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 SAGE2PA6NJ88 616 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 UGDHO60701 494 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 LDB3O75112 727 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 EEDO75530 441 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 MYO1DO94832 1006 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 SUPT7LO94864 414 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 OR4F21O95013 312 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 GBAP04062 536 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 TAC1P20366 129 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 PIK3CBP42338 1070 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 SRSF11Q05519 484 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 TCHHL1Q5QJ38 904 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 ABHD17BQ5VST6 288 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 TTC19Q6DKK2 380 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 LETMD1Q6P1Q0 360 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 METTL2BQ6P1Q9 378 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 MILR1Q7Z6M3 343 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 OR4N5Q8IXE1 308 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 C4orf33Q8N1A6 199 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 ARMC2Q8NEN0 867 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 NFAM1Q8NET5 270 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 OR1N1Q8NGS0 311 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 M1APQ8TC57 530 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 RGMAQ96B86 450 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 REPS1Q96D71 796 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 NTMT1Q9BV86 223 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF717Q9BY31 904 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 MMP25Q9NPA2 562 aa13.89□□□□□ -0.19
RABGGTA-211ENST00000559850 UBR5O95071 2799 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ARHGAP10A1A4S6 786 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 CLDN4O14493 209 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 CPN2P22792 545 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ATP5F1P24539 256 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 PTX3P26022 381 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 HNRNPH2P55795 449 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 HSD17B7P56937 341 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 HERVK_113P63132 956 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 PHEXP78562 749 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 CLCQ05315 142 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 MRPL49Q13405 166 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ERCC6LQ2NKX8 1250 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ACER2Q5QJU3 275 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF678Q5SXM1 525 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 C18orf63Q68DL7 685 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ATCAYQ86WG3 371 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF595Q8IYB9 648 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 SRFBP1Q8NEF9 429 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 DOK4Q8TEW6 326 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 AENQ8WTP8 325 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 UCN3Q969E3 161 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 HBEGFQ99075 208 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ERVK-6Q9BXR3 956 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms