RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 DHRSXQ8N5I4 330 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 NATD1Q8N6N6 113 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 OR2I1PQ8NGU4 316 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 MAGEE2Q8TD90 523 aaPredicted RBP16.95■□□□□ 0.3
SNX1-208ENST00000559844 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 LNP1A1A4G5 178 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 H7BY64 318 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 CER1O95813 267 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 GBAP04062 536 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 CELA2BP08218 269 aaPredicted RBP16.95■□□□□ 0.3
SNX1-208ENST00000559844 ZNF806P0C7X5 589 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 MYF6P23409 242 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 AK4P27144 223 aaPredicted RBP16.95■□□□□ 0.3
SNX1-208ENST00000559844 PSMB5P28074 263 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 ALDH3A2P51648 485 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 ILF3Q12906 894 aaKnown RBP eCLIP16.95■□□□□ 0.37e-7■■■■□ 23.2
SNX1-208ENST00000559844 ADRM1Q16186 407 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 RNF220Q5VTB9 566 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 IYDQ6PHW0 289 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 ZDHHC13Q8IUH4 622 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 ANKRD53Q8N9V6 530 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 TTLQ8NG68 377 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 PRAP1Q96NZ9 151 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 PHOX2BQ99453 314 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 ERVK-11Q9UQG0 969 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 PCDHGB5Q9Y5G0 923 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 COLEC10Q9Y6Z7 277 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 CROCCQ5TZA2 2017 aa16.95■□□□□ 0.3
SNX1-208ENST00000559844 PIAS2O75928 621 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 KLHL18O94889 574 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 TPP2P29144 1249 aaPredicted RBP16.94■□□□□ 0.3
SNX1-208ENST00000559844 CAPGP40121 348 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 ABATP80404 500 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 VAC14Q08AM6 782 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 DAG1Q14118 895 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 SF3A2Q15428 464 aaKnown RBP16.94■□□□□ 0.3
SNX1-208ENST00000559844 RGNQ15493 299 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 RPE65Q16518 533 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 TMEM214Q6NUQ4 689 aaKnown RBP16.94■□□□□ 0.3
SNX1-208ENST00000559844 SLC30A9Q6PML9 568 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 PTOV1Q86YD1 416 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 OR52E1Q8NGJ3 308 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 RDH12Q96NR8 316 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 MIEF1Q9NQG6 463 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 NDUFA13Q9P0J0 144 aa16.94■□□□□ 0.3
SNX1-208ENST00000559844 EP300Q09472 2414 aaPredicted RBP16.94■□□□□ 0.3
SNX1-208ENST00000559844 A0A1B0GTQ1 180 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 G3V2T6 193 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 PLPP1O14494 284 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CAPN5O15484 640 aaPredicted RBP16.93■□□□□ 0.3
SNX1-208ENST00000559844 CLPTM1O96005 669 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 IL3P08700 152 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 EFNA1P20827 205 aaPredicted RBP16.93■□□□□ 0.3
SNX1-208ENST00000559844 GSTM2P28161 218 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 KDELR2P33947 212 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 RXRGP48443 463 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ARSFP54793 590 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CYP4F2P78329 520 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CSNK1G2P78368 415 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 MC1RQ01726 317 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 NHLH1Q02575 133 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 GAB1Q13480 694 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 BIRC2Q13490 618 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 SHBQ15464 509 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNX1-208ENST00000559844 LIN52Q52LA3 116 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 LRRC23Q53EV4 343 aaPredicted RBP16.93■□□□□ 0.3
SNX1-208ENST00000559844 OR2A1Q8NGT9 310 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 GPBAR1Q8TDU6 330 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 NRTNQ99748 197 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 GSDMCQ9BYG8 508 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CHST8Q9H2A9 424 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 RAD21L1Q9H4I0 556 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 KIR3DX1Q9H7L2 352 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 SEMA4GQ9NTN9 838 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ADAM29Q9UKF5 820 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 MYRFQ9Y2G1 1151 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 TRBC2A0A5B9 178 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 PROB1E7EW31 1015 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 H0YAE9 185 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 AQP9O43315 295 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 OR1F1O43749 312 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 TBX19O60806 448 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CLEC3AO75596 197 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 H6PDO95479 791 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 C6orf47O95873 294 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 NDUFS1P28331 727 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ACTR1BP42025 376 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 RPL5P46777 297 aaKnown RBP16.93■□□□□ 0.3
SNX1-208ENST00000559844 MAPK12P53778 367 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ACTR1AP61163 376 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 EPS8Q12929 822 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 BNIP3Q12983 259 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ELOCQ15369 112 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 WASH2PQ6VEQ5 465 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 TAF8Q7Z7C8 310 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 STK32CQ86UX6 486 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 NUDT13Q86X67 352 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms