RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SSR2P43308 183 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 RAP1GDS1P52306 607 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 HNRNPFP52597 415 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 HSD17B7P56937 341 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 PHEXP78562 749 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 INAQ16352 499 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 FAM153CQ494X1 144 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 LGSNQ5TDP6 509 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 LIPJQ5W064 366 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 RPUSD3Q6P087 351 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 METTL2BQ6P1Q9 378 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF793Q6ZN11 406 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 CHSY3Q70JA7 882 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 CLNKQ7Z7G1 428 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 SCUBE1Q8IWY4 988 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF595Q8IYB9 648 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 GSPT2Q8IYD1 628 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 KIF2BQ8N4N8 673 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 HORMAD2Q8N7B1 307 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 ST6GALNAC3Q8NDV1 305 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 TMEM52Q8NDY8 209 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 HUS1BQ8NHY5 278 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 FAR1Q8WVX9 515 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 REPS1Q96D71 796 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 PHF21BQ96EK2 531 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 CSF3RQ99062 836 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 BARD1Q99728 777 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 TBCDQ9BTW9 1192 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 IPPKQ9H8X2 491 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 LYRM4Q9HD34 91 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 PRDM7Q9NQW5 492 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 PNO1Q9NRX1 252 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 OLAHQ9NV23 265 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 ADGRE2Q9UHX3 823 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 DAPP1Q9UN19 280 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 HIVEP3Q5T1R4 2406 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 TGFBR3LH3BV60 316 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 RTCAO00442 366 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 MAN1A2O60476 641 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 UGDHO60701 494 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 MYO1DO94832 1006 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 RASAL1O95294 804 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 EDN3P14138 238 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 ATP5A1P25705 553 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 CPSF6Q16630 551 aaKnown RBP eCLIP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 AP5B1Q2VPB7 878 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 KHDRBS2Q5VWX1 349 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 RNF175Q8N4F7 328 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 C5orf34Q96MH7 638 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 MTERF1Q99551 399 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 NPAS2Q99743 824 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 UTP23Q9BRU9 249 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 CENPKQ9BS16 269 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 MRPL46Q9H2W6 279 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 OR51B5Q9H339 312 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 NOL11Q9H8H0 719 aaKnown RBP11.78□□□□□ -0.52
LRRC28-214ENST00000559433 DMRT3Q9NQL9 472 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 ANKRD10Q9NXR5 420 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 SLC5A6Q9Y289 635 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 PCDHGA11Q9Y5H2 935 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 SPACA6W5XKT8 324 aa11.78□□□□□ -0.52
LRRC28-214ENST00000559433 ZGRF1Q86YA3 2104 aa11.77□□□□□ -0.52
LRRC28-214ENST00000559433 GABRR3A8MPY1 467 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 H0YIV9 168 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 STX16-NPEPL1H3BU86 382 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 CYR61O00622 381 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 STX16O14662 325 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 SEMA7AO75326 666 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 SCELO95171 688 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 CLDN9O95484 217 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 HIST1H1TP22492 207 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 GCAP28676 217 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 PPP2R1BP30154 601 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 ST13P50502 369 aaKnown RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 CCNG1P51959 295 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 OC90Q02509 493 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TUBA3CQ13748 450 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TERF2Q15554 542 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TEX35Q5T0J7 233 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TUBA3EQ6PEY2 450 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 LGI4Q8N135 537 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 L3MBTL4Q8NA19 623 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 NFAM1Q8NET5 270 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 DNAJB8Q8NHS0 232 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 ATP6V1E2Q96A05 226 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 RGMAQ96B86 450 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 CDK15Q96Q40 435 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 MAPKAP1Q9BPZ7 522 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 MRPL57Q9BQC6 102 aaKnown RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 SORBS1Q9BX66 1292 aaKnown RBP11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TXLNGYQ9BZA5 131 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms