RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 VN1R4Q7Z5H5 301 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 PLD3Q8IV08 490 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 SRFBP1Q8NEF9 429 aaKnown RBP15.9■□□□□ 0.14
PSEN1-224ENST00000559361 MARVELD3Q96A59 401 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 MOCOSQ96EN8 888 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 CMTM7Q96FZ5 175 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 IRAK4Q9NWZ3 460 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 NTNG1Q9Y2I2 539 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 TRAF6Q9Y4K3 522 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 COPG1Q9Y678 874 aaKnown RBP15.9■□□□□ 0.14
PSEN1-224ENST00000559361 PCNX1Q96RV3 2341 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 TACC2O95359 2948 aa15.9■□□□□ 0.14
PSEN1-224ENST00000559361 PCM1Q15154 2024 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 H3BMH7 237 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 NDUFS4O43181 175 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 NRP2O60462 931 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 PCNAP12004 261 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 PTX3P26022 381 aaPredicted RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 MDH1P40925 334 aaKnown RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 TSFMP43897 325 aaKnown RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 RPL14P50914 215 aaKnown RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 OCRLQ01968 901 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 TGM3Q08188 693 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 CSTF3Q12996 717 aaKnown RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 RAPSNQ13702 412 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 PRTGQ2VWP7 1150 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 DEFB110Q30KQ9 67 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 WASHC2DQ5SRD0 308 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 Q6ZS92 163 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 ABHD13Q7L211 337 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 ST6GALNAC3Q8NDV1 305 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 OR1L3Q8NH93 324 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 HUS1BQ8NHY5 278 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 CREB3L4Q8TEY5 395 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 ZNF473Q8WTR7 871 aaKnown RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 SELENOMQ8WWX9 145 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 MVB12AQ96EY5 273 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 SLC6A16Q9GZN6 736 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 ZNF552Q9H707 407 aaPredicted RBP15.89■□□□□ 0.13
PSEN1-224ENST00000559361 DMRT3Q9NQL9 472 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 PCDHGA10Q9Y5H3 936 aa15.89■□□□□ 0.13
PSEN1-224ENST00000559361 A0A088AWK7 358 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 LOC105369274A0A096LPK9 316 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 LOC102723532A0A0G2JNH3 316 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 A0A1B0GTL3 188 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 MANBAO00462 879 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 KLF7O75840 302 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 SEMA3DO95025 777 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 ZNF10P21506 573 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 GRNP28799 593 aaKnown RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 ARRB2P32121 409 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 CUL3Q13618 768 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 FAM53BQ14153 422 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 ELOAQ14241 798 aaKnown RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 MYBPC3Q14896 1274 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 HERC3Q15034 1050 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 NCF4Q15080 339 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 MUM1Q2TAK8 710 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 ADPRMQ3LIE5 342 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 ZNF385CQ66K41 422 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 TMEM214Q6NUQ4 689 aaKnown RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 CRLF3Q8IUI8 442 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 OR4N4Q8N0Y3 316 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 CCT6BQ92526 530 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 GAL3ST3Q96A11 431 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 METTL2AQ96IZ6 378 aaKnown RBP15.88■□□□□ 0.13
PSEN1-224ENST00000559361 IP6K3Q96PC2 410 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 SORT1Q99523 831 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 SERPINI1Q99574 410 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 NDC1Q9BTX1 674 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 MS4A8Q9BY19 250 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 PRM3Q9NNZ6 103 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 VTI1BQ9UEU0 232 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 SLC22A7Q9Y694 548 aa15.88■□□□□ 0.13
PSEN1-224ENST00000559361 DCHS2Q6V1P9 2916 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 LRIT2A6NDA9 550 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 FFAR3O14843 346 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 GPR42O15529 346 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 ITM2AO43736 263 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 EIF2S1P05198 315 aaKnown RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 SOX8P57073 446 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 SSPNQ14714 243 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 CES4AQ5XG92 561 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 TRIM46Q7Z4K8 759 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 VN1R5Q7Z5H4 357 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 MRGPREQ86SM8 312 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 RAB43Q86YS6 212 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 ZNF781Q8N8C0 355 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 PIWIL2Q8TC59 973 aaKnown RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 PROKR1Q8TCW9 393 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 CLIP3Q96DZ5 547 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 DPH2Q9BQC3 489 aaPredicted RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 ROGDIQ9GZN7 287 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 C20orf27Q9GZN8 174 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 REXO4Q9GZR2 422 aaKnown RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 ACTR5Q9H9F9 607 aaPredicted RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 CLK4Q9HAZ1 481 aaKnown RBP15.87■□□□□ 0.13
PSEN1-224ENST00000559361 ZDHHC2Q9UIJ5 367 aa15.87■□□□□ 0.13
PSEN1-224ENST00000559361 RUVBL1Q9Y265 456 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms