RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 FBXW2Q9UKT8 454 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 KALRNO60229 2985 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 PSMD12O00232 456 aaPredicted RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 FOXE1O00358 373 aaPredicted RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 MANBAO00462 879 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 CD97P48960 835 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 IFT88Q13099 833 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 AIMP2Q13155 320 aaKnown RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 NSDHLQ15738 373 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 SFT2D3Q587I9 215 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 LIPMQ5VYY2 423 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 TCTN3Q6NUS6 607 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 SCIMPQ6UWF3 145 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 ATG14Q6ZNE5 492 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 QSOX2Q6ZRP7 698 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 NDUFAF7Q7L592 441 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 SCUBE1Q8IWY4 988 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 UCN3Q969E3 161 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 RGMAQ96B86 450 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 IMMP1LQ96LU5 166 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 PTCHD1Q96NR3 888 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 SMC6Q96SB8 1091 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 MRPL1Q9BYD6 325 aaKnown RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 ELOVL6Q9H5J4 265 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 ZNF552Q9H707 407 aaPredicted RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 MID1IP1Q9NPA3 183 aa17.57■□□□□ 0.4
CASC4-209ENST00000559222 PCDHGA9Q9Y5G4 932 aaKnown RBP17.57■□□□□ 0.4
CASC4-209ENST00000559222 A0A0A6YYD5 115 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 PRMT3O60678 531 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 ITGAMP11215 1152 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 IL10P22301 178 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 JAK1P23458 1154 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 PTX3P26022 381 aaPredicted RBP17.56■□□□□ 0.4
CASC4-209ENST00000559222 PHEXP78562 749 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 TGM3Q08188 693 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 CUL3Q13618 768 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 MPP2Q14168 576 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 MYBPC3Q14896 1274 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 AP5B1Q2VPB7 878 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 CES4AQ5XG92 561 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 LRIG3Q6UXM1 1119 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 ZCCHC23Q6ZST2 131 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 ASB18Q6ZVZ8 466 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 SELENOMQ8WWX9 145 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 METTL21AQ8WXB1 218 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 CCDC126Q96EE4 140 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 THOC3Q96J01 351 aaKnown RBP17.56■□□□□ 0.4
CASC4-209ENST00000559222 IQCGQ9H095 443 aaKnown RBP17.56■□□□□ 0.4
CASC4-209ENST00000559222 CLK4Q9HAZ1 481 aaKnown RBP17.56■□□□□ 0.4
CASC4-209ENST00000559222 PRDM9Q9NQV7 894 aa17.56■□□□□ 0.4
CASC4-209ENST00000559222 TLN1Q9Y490 2541 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 A0A088AWK7 358 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 TCRBV16S1A1N1A0A5B0 115 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 ARHGAP10A1A4S6 786 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 EIF4E1BA6NMX2 242 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 WASHC1A8K0Z3 465 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 A8MUA0 341 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 CTIFO43310 598 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 ERLIN1O75477 346 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 MLYCDO95822 493 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PRR35P0CG20 571 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 ZNF10P21506 573 aaPredicted RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 SERPINB3P29508 390 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 ARRB2P32121 409 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 HPDP32754 393 aaPredicted RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 ETV4P43268 484 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PGDP52209 483 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PKNOX1P55347 436 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SOX8P57073 446 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 OR4D2P58180 307 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 ID2Q02363 134 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SLAMF1Q13291 335 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 C18orf63Q68DL7 685 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 MRM1Q6IN84 353 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 PAPD4Q6PIY7 484 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 EFCAB3Q8N7B9 438 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SRFBP1Q8NEF9 429 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 PSMF1Q92530 271 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PKNOX2Q96KN3 472 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SERPINI1Q99574 410 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SMAD5Q99717 465 aaKnown RBP17.55■□□□□ 0.4
CASC4-209ENST00000559222 SLC29A3Q9BZD2 475 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 LYRM4Q9HD34 91 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PRTFDC1Q9NRG1 225 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 RIC8BQ9NVN3 520 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 PPT2Q9UMR5 302 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 SLC12A4Q9UP95 1085 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 ATG4BQ9Y4P1 393 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 CSAG2Q9Y5P2 127 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 COL6A6A6NMZ7 2263 aa17.55■□□□□ 0.4
CASC4-209ENST00000559222 CFAP46Q8IYW2 2715 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 LDB3O75112 727 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 ESRRBO95718 433 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 CHRNGP07510 517 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 CYC1P08574 325 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 TPP2P29144 1249 aaPredicted RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 HMOX2P30519 316 aa17.54■□□□□ 0.4
CASC4-209ENST00000559222 ST13P50502 369 aaKnown RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 GALNT1Q10472 559 aaPredicted RBP17.54■□□□□ 0.4
CASC4-209ENST00000559222 TBL3Q12788 808 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms