RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 K7EPI3 171 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 CYR61O00622 381 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 FCHO1O14526 889 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 NME2P1O60361 137 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 NME2P22392 152 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 TRHRP34981 398 aaPredicted RBP14.09□□□□□ -0.15
SMAD6-203ENST00000558937 CASP2P42575 452 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 HLCSP50747 726 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 RCN2Q14257 317 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 MAPKAPK3Q16644 382 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 HIST2H2ACQ16777 129 aaPredicted RBP14.09□□□□□ -0.15
SMAD6-203ENST00000558937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.09□□□□□ -0.15
SMAD6-203ENST00000558937 HIST2H2AA3Q6FI13 130 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 MED27Q6P2C8 311 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 UBE3DQ7Z6J8 389 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 SIAH3Q8IW03 269 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 CENPLQ8N0S6 344 aaPredicted RBP14.09□□□□□ -0.15
SMAD6-203ENST00000558937 THAP3Q8WTV1 239 aaPredicted RBP14.09□□□□□ -0.15
SMAD6-203ENST00000558937 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 LRRC1Q9BTT6 524 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 PRM3Q9NNZ6 103 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 ADAP2Q9NPF8 381 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 OPTCQ9UBM4 332 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 NPIPA1Q9UND3 350 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 ACOT9Q9Y305 439 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
SMAD6-203ENST00000558937 NBPF19A0A087WUL8 3843 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 A0A087X1B8 175 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 HMX2A2RU54 273 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 RTCAO00442 366 aaKnown RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 CCL21O00585 134 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 SLC19A2O60779 497 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 SH3BGRLO75368 114 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MLYCDO95822 493 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 C2P06681 752 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 PCNAP12004 261 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MTHFD2P13995 350 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 GPR143P51810 404 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 UAP1Q16222 522 aaPredicted RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 C3AR1Q16581 482 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 UBAP2Q5T6F2 1119 aaKnown RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MROH9Q5TGP6 573 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 LAS2Q8IYD9 372 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 CPSF7Q8N684 471 aaKnown RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 SRFBP1Q8NEF9 429 aaKnown RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 ITLN2Q8WWU7 325 aaPredicted RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 UBE2E3Q969T4 207 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 TMEM125Q96AQ2 219 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MAGED4Q96JG8 741 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 C16orf45Q96MC5 204 aaPredicted RBP14.08□□□□□ -0.16
SMAD6-203ENST00000558937 KCNC2Q96PR1 638 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MAPKAP1Q9BPZ7 522 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 TBCDQ9BTW9 1192 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 ROGDIQ9GZN7 287 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 SNX15Q9NRS6 342 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
SMAD6-203ENST00000558937 MYOCOSA0A1B0GUC4 107 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 SYNDIG1LA6NDD5 238 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 SYCE1LA8MT33 242 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 PRKNO60260 465 aaPredicted RBP14.07□□□□□ -0.16
SMAD6-203ENST00000558937 CTNSO60931 367 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 ITGA10O75578 1167 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 SCELO95171 688 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 TGFB1P01137 390 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 IFNA16P05015 189 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 ZNF24P17028 368 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 ATP5A1P25705 553 aaKnown RBP14.07□□□□□ -0.16
SMAD6-203ENST00000558937 PCDH1Q08174 1060 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 NAA30Q147X3 362 aaPredicted RBP14.07□□□□□ -0.16
SMAD6-203ENST00000558937 SETDB1Q15047 1291 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 ELAVL1Q15717 326 aaKnown RBP14.07□□□□□ -0.16
SMAD6-203ENST00000558937 KRTCAP3Q53RY4 240 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 RNFT1Q5M7Z0 435 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 GRHL2Q6ISB3 625 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 CYP4Z2PQ8N1L4 340 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 TMEM132CQ8N3T6 1108 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 ACOT4Q8N9L9 421 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 OR7G3Q8NG95 312 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 RHEBL1Q8TAI7 183 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 CCDC77Q9BR77 488 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 LYRM4Q9HD34 91 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 KCMF1Q9P0J7 381 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 TINAGQ9UJW2 476 aa14.07□□□□□ -0.16
SMAD6-203ENST00000558937 A0A096LPK6 155 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 SAP18O00422 153 aaKnown RBP14.06□□□□□ -0.16
SMAD6-203ENST00000558937 ASNA1O43681 348 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 LDB3O75112 727 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 ZFAND5O76080 213 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
SMAD6-203ENST00000558937 GFAPP14136 432 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 EPB42P16452 691 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 HIST1H1TP22492 207 aaPredicted RBP14.06□□□□□ -0.16
SMAD6-203ENST00000558937 SERPINB1P30740 379 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 SSR2P43308 183 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 MEOX1P50221 254 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 CASP6P55212 293 aa14.06□□□□□ -0.16
SMAD6-203ENST00000558937 DDX39BQ13838 428 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms